Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCSSSSSSSSCCCCCSSSC MESRKDITNQEEIWKMKPRRNLEDNDYLQTAHADEFDCPSELQHAQELFPQWHLPIKIAAVMASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQVHNGTKYKKFPHWLDKWMLTRKQFGLLSLFFAVLHAIYTLSYAMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQVHGRINFLTL |
1 | 6y9bC | 0.78 | 0.58 | 16.27 | 1.00 | DEthreader | | ------------------------------------------------FP-QWHLPIKIAAIIASLTFLYTLLEVIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIV--------KKF-HWLDKWMLTRKQFGLLSFFFAVLHAIYSLSYPMRSYRYKLL-WA--QV----KEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSLLL |
2 | 6y9bC | 0.93 | 0.75 | 20.97 | 1.76 | SPARKS-K | | -----------------------------------------------LFPQWHLPIKIAAIIASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQLHNGT--KKFPHWLDKWMLTRKQFGLLSFFFAVLHAIYSLSYPMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSLLL |
3 | 6y9bC | 0.88 | 0.69 | 19.41 | 0.87 | MapAlign | | --------------------------------------------------PQWHLPIKIAAIIALTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQLHNGTK--KFPHWLDKWMLTRKQFGLLSFFFAVLHAIYSLSYPMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSLLL |
4 | 6y9bC | 0.93 | 0.75 | 20.97 | 0.75 | CEthreader | | -----------------------------------------------LFPQWHLPIKIAAIIASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQLHNGTK--KFPHWLDKWMLTRKQFGLLSFFFAVLHAIYSLSYPMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSLLL |
5 | 6hcyC | 0.38 | 0.38 | 11.12 | 1.38 | MUSTER | | LQSGNDSKAKQRVMDIVRNLGLTPMDQGSLMAAKEIEKY-----PLQLFPMWRFPFYLSAVLCVFLFFYCVIRDVIYPYVYEKKDNTFRMAISIPNRIFPITALTLLALVYLPGVIAAILQLYRGTKYRRFPDWLDHWMLCRKQLGLVALGFAFLHVLYTLVIPIRYYVRWRLGNLTVTQAILKKENPFSTSSAWLSDSYVALGILGFFLFVLLGITSLPSVSNAVNWREFRFVQSKLGYLTLIL |
6 | 6hcyC | 0.37 | 0.37 | 11.02 | 7.26 | HHsearch | | DASRQVFGNDSK--AKQRVMDIVRNLGLTPMDQGSLMAAKIEKYPLQLFPMWRFPFYLSAVLCVFLFFYCVIRDVIYPYVYEKKDNTFRMAISIPNRIFPITALTLLALVYLPGVIAAILQLYRGTKYRRFPDWLDHWMLCRKQLGLVALGFAFLHVLYTLVIPIRYYVRWRLGNLTVTQAILKKENPFSTSSAWLSDSYVALGILGFFLFVLLGITSLPSVSNAVNWREFRFVQSKLGYLTLIL |
7 | 6y9bC | 0.93 | 0.74 | 20.85 | 2.28 | FFAS-3D | | -----------------------------------------------LFPQWHLPIKIAAIIASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQLHNGT--KKFPHWLDKWMLTRKQFGLLSFFFAVLHAIYSLSYPMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQKLGIVSLLL- |
8 | 6y9bC | 0.84 | 0.66 | 18.52 | 1.03 | EigenThreader | | -----------------------------------------------LFPQWHLPIKIAAIIASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQLHNGTKK--FPHWLDKWMLTRKQFGLLSFFFAVLHAIYSLSSYRYKLLNWAYQQVQQN-----KEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSLLL |
9 | 6y9bC | 0.93 | 0.75 | 20.97 | 1.36 | CNFpred | | -----------------------------------------------LFPQWHLPIKIAAIIASLTFLYTLLREVIHPLATSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQLHNGT--KKFPHWLDKWMLTRKQFGLLSFFFAVLHAIYSLSYPMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSLLL |
10 | 4a01A | 0.07 | 0.06 | 2.49 | 1.00 | DEthreader | | V-KE--NA--EG-----------------------------TLEARKGVGKAFITAFRSGAVMGFLAANGLLVLYIAINLFKYLFEAITGYGLGGSSMALGR-GGG-YTKAADVGADLVGKVERNIPE-DESHIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSITTVDVLT---PKVETLGVLAGSLVSGVQIAISASNTGGAWDNAKYASHARSLCHKAAVIGDTIGDPLKDTS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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