Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700
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| SS Seq | CCCCCCCCCCCCCSSSSSSSSSCCHHHHHCCCHHHHHHHHHHHHHHHHHHSSSCCCCCCCCSSHHHCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCHHHCCCCCCCCCCCSCCCCCCSCCCCCCCCCCCCCCCCCCCSCCCCCCCSSCCCCCCHHHCCCCCCCCCCCCCCCCCSCCCCCCHHHHCCCCCCCCCSSCCCCCCSSCCCCCCCCSCCCCCCCCCSSCCCCCCSCCCCCCCSCCCSCCCCCCSCCCCCCSCCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCCHHHCCCCCCCCCSSCCCCCCSCCCCCCHHHHCCCCCCCCCSSCCCCCCSCCCCCCCCCSSCCCCCCCCSSCCCCCCSCCCCCCHHHHHCCCCCCCCSSCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCSCCCCCCCCCSCCCCCCCCCSCCCCCCCSCCCCCCCHHHCCCCCCCCCSCCCCCCCSCCCCCCCHHHCCCCCCCCCSCCCCCCCSCCCCCCCCCSCCCCCCCCCSCCCCCCCSCCCCCCCCCSCCCSCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCC MEARSMLVPPQASVCFEDVAMAFTQEEWEQLDLAQRTLYREVTLETWEHIVSLGLFLSKSDVISQLEQEEDLCRAEQEAPRDWKATLEENRLNSEKDRAREELSHHVEVYRSGPEEPPSLVLGKVQDQSNQLREHQENSLRFMVLTSERLFAQREHCELELGGGYSLPSTLSLLPTTLPTSTGFPKPNSQVKELKQNSAFINHEKNGADGKHCESHQCARAFCQSIYLSKLGNVETGKKNPYEYIVSGDSLNYGSSLCFHGRTFSVKKSDDCKDYGNLFSHSVSLNEQKPVHFGKSQYECDECRETCSESLCLVQTERSGPGETPFRCEERCAAFPMASSFSDCNIIQTTEKPSVCNQCGKSFSCCKLIHQRTHTGEKPFECTQCGKSFSQSYDLVIHQRTHTGEKPYECDLCGKSFTQRSKLITHQRIHTGEKPYQCIECRKSFRWNSNLIVHQRIHTGEKPYECTHCGKSFSQSYELVTHKRTHTGEKPFKCTQCGKSFSQKYDLVVHQRTHTGEKPYECNLCGKSFSQSSKLITHQRIHTGEKPYQCIECGKSFRWNSNLVIHQRIHTGEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKPYECNECGKAFNRSTQLIRHLQIHTGEKPYKCNQCNKAFARSSYLVMHQRTHTGEKPFECSQCGKAFSGSSNLLSHHRIHSGEKPYECSDCGKSFRQQSQLVVHRRTHTGEKP |
1 | 5v3jE | 0.48 | 0.19 | 5.45 | 1.02 | CEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---- |
2 | 1vt4I3 | 0.06 | 0.05 | 2.00 | 2.13 | MapAlign | | --------------------------------LHRSIVDHYNIPKTF-DSDDLIPPYLDQYFYSHIG---------HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSI----LNTLQQLKFYKPYIC-----DNDPKYERLVNAILDF-----------------------------------LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQ---------------------------------------RGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------- |
3 | 5v3jE | 0.42 | 0.16 | 4.72 | 1.02 | EigenThreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHV--GEKPYKCQ-ECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFIS---DSHLLRHQSVHTGETPKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTG--DRPHKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-------------------------------- |
4 | 3jb9U | 0.06 | 0.03 | 1.54 | 1.26 | MapAlign | | ---------------MFCSISGETPKEPVISRVSGNVYEKRLIEQVIRSKDPVTQQECTLEDLVPVKVPDFVRPRPPSATSLPALLSLFQEEWDSVALEQFELR-----------------------RNLTETKQEL----------STALYSLDAAL---------------------------------------------------------RVISRLTKERDEARE---------------------------------------ALAKFSDNLSSKRKRTKLQPKWATDDAVSQLLQATPST-------------------------------------------ILENLETESTSFFPS-------PENSSFVLCLHKDELLCLDI------QSEGSALACCWLTSSKIAVA---------TADAISIFEFPVSSSGLQSV---GEIDEKV---NFLQAHPSGEYLLAASNE------------KCYIFSKSQVYNITVAQ-------HITSLAVHPDGNLFVA---------GLENGELRFFETSSGNELT----K-FGPHSSPVKTLQFGENGYWLVVTT----------NSDIFIWDLRKSELVQKI-----PLQTKVAAVSLDITQLLVSSDGE------------TLYVHIYVKSRCMSQT------HVSSISNLVWLNELHQLLFSNGAILRLG--------- |
5 | 5v3jE | 0.48 | 0.19 | 5.45 | 2.57 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---- |
6 | 5v3jE | 0.51 | 0.20 | 5.67 | 4.28 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-------------------------------- |
7 | 5v3mC | 0.48 | 0.19 | 5.45 | 5.21 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---- |
8 | 5yz0A | 0.04 | 0.03 | 1.39 | 0.67 | DEthreader | | LFPFEAEAYASSNSDGI-PK------------SLNPSKEIKHVDMNQKSILWALKQKSLALCTVHCSHQPSVVIWKDIYMQVNSNLISYTYNQDSDIVKKFRNLKATSQHEFDNHETDAVLDPKDVIKHILESL---DSEDGFI-KEL-FV---LRMKEAYTHAQISR--E----L--------ILTTGDIGRAAKGDLVPFA-LL-----HLLHCLLSK--S----------ALVAAKSVKLQS-FSQYKKPIQFLVESLHSS--T------LPNTP-QNADVRKQDVHQREMALNTLS---NVFKASPAASALIRTLGKQLELER-------LQPKLLGILAFFMMITYDLKLVRAEQIV-------Y-RGYEYIVRYAKEPILALRRALL-NR--K-HHMVHFYLKGRSLQNQFIY--LAPYQFLTFIKVFYPAMVDATQIPTLASHEWA-YI---AGFDDMVEILKISLKGGKFYIWVNNTAG--PILKLPPIFEWFTFSRSAYCRSTA--S---GYILGLGDRHGNHVDFNCLFNKGET--F--------EVPE-----------------------------------------------------------------------------------------------------------------------------------LNET--------------------- |
9 | 5v3jE | 0.45 | 0.17 | 5.10 | 1.94 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT-------------------------------------------------------------------------------------------------------------------- |
10 | 5v3jE | 0.48 | 0.19 | 5.45 | 2.73 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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