>Q6NT46 (116 residues) MSWRGRSTYRPRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQD EGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC |
Sequence |
20 40 60 80 100 | | | | | MSWRGRSTYRPRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 97555555578987778985557777788877788889977788987668899987766678887778886554211137888887889987667778995557788766788889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | MSWRGRSTYRPRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC |
Prediction | 75454453445455651635634452446445665657647676445766634575656576456464573644476375455675576446475642356752533665665478 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSWRGRSTYRPRPRRYVEPPEMIGPMRPEQFSDEVEPATPEEGEPATQRQDPAAAQEGQDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPNPEEVKTPEEGEKQSQC | |||||||||||||||||||
1 | 3rceA5 | 0.09 | 0.09 | 3.25 | 0.52 | CEthreader | ---------IYMPYRMLRIMPVVAQFANTNPDNGEQEKSLFFSQANAIAQDGSVMLDNGVEIINDFRALKVEGASIPLKAFVDIESITNGKFYYNEIDSKAQIYLLFLREYKSFVI | |||||||||||||
2 | 1oczC | 0.04 | 0.04 | 2.16 | 0.50 | EigenThreader | MTSGLTMWFHFNSMTLLMIGLTTNMLTMYQWWRDVIREHHTYHSSLAPTPELGGCWPPTGIHPEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASE | |||||||||||||
3 | 3tb8A | 0.16 | 0.16 | 5.42 | 0.32 | FFAS-3D | SSVIGWPAVRERMRRAEPAADGVGAASRDEAQEEEKVGFPVTPQVPLRPMTYKAAVDKEKGGLEGLIHSQRRQDILDLWIYHTQGYFPDGPGIRYPLLVPVEPDKVEEANKGENTS | |||||||||||||
4 | 3hgfC | 0.06 | 0.04 | 1.89 | 1.32 | SPARKS-K | ----------------KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKNINGKSLNKLFLEKIKKKSENMIKSMEKYIKDLDEIKEQSPKAEMN---------------- | |||||||||||||
5 | 3ktdA | 0.27 | 0.06 | 1.85 | 0.58 | CNFpred | ---------------------------------------------------RSGAKSAVDEGFDVSA--DLEATLQRAA------------------------------------- | |||||||||||||
6 | 6yvuB | 0.09 | 0.08 | 2.99 | 0.83 | DEthreader | -------LERLERLEERTNLKMKA-TL--TKSISEAMLLQQHEEIDLQLLEKERSDDLLKDKTKSAEIRHEKELEPWDLQLQEKESQIAVVKNLERLEYLQEKKKIK-LQ-EIMKI | |||||||||||||
7 | 1h09A | 0.04 | 0.03 | 1.89 | 0.79 | MapAlign | -----NIVLLDDEEDDKPKTAGTWKQDSKGWWFRRNNGSFPYNKWEKIGGVWYYFDSKGYCLTSEWLKDNEKWYYLKDNGAMATGWVLVGSEWYYMDDSGAMVTGWVKYKNNWYYM | |||||||||||||
8 | 2nbiA2 | 0.13 | 0.11 | 3.91 | 0.98 | MUSTER | -----QPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDTDPSVNRPDCDKLSTAIDFTCPTCCPT---QCRPDNPMFS-PSPD---GSPPVCSPTMMPSPLPSPTE- | |||||||||||||
9 | 2xzm2 | 0.14 | 0.09 | 2.95 | 0.39 | HHsearch | ISRDSKHKRRAKKRAFEKGRQALEKNIEEQF---------VSQRI-LACITSRPGQSGRA-DGYILEGKELEFYIRKLQSKKK--------------------------------- | |||||||||||||
10 | 3rceA | 0.10 | 0.10 | 3.79 | 0.52 | CEthreader | DTNKTRDVYIYMPYRMLRIMPVVAQFANTNPDNGEQEKSLFFSQANAIAQDGSVMLDNGVEIINDFRALKVEGASIPLKAFVDIESITNGKFYYNEIDSKAQIYLLFLREYKSFVI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |