Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCC MEVVPAEVNSLLPEEIMDTGITLVDDDSIEAVIVSSPIPMETELEEIVNINSTGDSTATPISTEPITVYSNHTNQVAVNTTITKADSNTTVKPAFPSGLQKLGAQTPVTISANQIILNKVSQTSDLKLGNQTLKPDGQKLILTTLGKSGSPIVLALPHSQLPQAQKVTTQAQSGDAKLPPQQIKVVTIGGRPEVKPVIGVSALTPGSQLINTTTQPSVLQTQQLKTVQIAKKPRTPTSGPVITKLIFAKPINSKAVTGQTTQVSPPVIAGRVLSQSTPGTPSKTITISESGVIGSTLNSTTQTPNKIAISPLKSPNKAVKSTVQTITVGGVSTSQFKTIIPLATAPNVQQIQVPGSKFHYVRLVTATSASSSTQPVSQNPSTNTQPLQQAKPVVVNTTPTQLQQSSYVSIASNSTFTGTSGIQTQAR |
1 | 5odsA | 0.15 | 0.07 | 2.54 | 1.05 | CNFpred | | ----------------------------------------------------------------------------------------------------------VIALKAKTLQIFNIE--MKSKMKAHTMT--DDVTFWKWIS--LNTVALVTD-----------------------NAVYHWSME--GESQPVKMFDRHSAGCQIINYRTD-----QKWLLLTGISAQQ-----NRVVGAMQLYSV--------KVSQPIE-GHAASFAQFKMEGNESTLFCFAVRG----------QAGGKLHIIEVGTPNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLET---------------------GTCIYMNR---ISGETIFVTAPHE-------------- |
2 | 6vbu7 | 0.08 | 0.07 | 3.02 | 1.11 | MapAlign | | LLPARATQKVVVGDHDGIVMCFGMKKGEAVTVFKTLPGQKIARLELGGALNTPQEKIFIAAGSEIRGFTKRGKQFLSFESIKAMHISGSDLFLSASYIYNHYCDCKDQHYYLSGDKINDVICLPVERLLREVPVLACQDRVLRVLQGSDVTYEIEVPGPPTVLALHNGNGGDSGEDLLFGTKLGLIQITTSKPIHKWEILCVDSFDIVGDGVKDLLVGRDDGMVEVYGFDNANEPVLRFDHTLSESVTSIQGGCVGKDGYDEIVVSTYNDKFTLNKDDASYSLILEAVVSFSSCDSESNDNFLLATYRGQFSFSELHSWVVFCMPEVPEKPPAGECVTFYFQNTFLDTQLESTYRKGEGVFKSDNISTISILKDVLSKEATKRKINLNISYEINEVSVKHTLKLIHPKLEYQLLLAKKVQLIDALK- |
3 | 3u1wA | 0.10 | 0.06 | 2.08 | 0.66 | CEthreader | | ---------------------------------------------------------------------------------------------------QGIIPLPPVENAFQEKYPDAKNPVFEIEGNYYVVDNNGGSETTAWFTDQGIWEKIDISFAQLPAA---VSTAFKQSFYSNWTVDDTYAINRLNGIVYKIEAEQSNSEVDLYYSQYGNLIKAVDDEINNDAP------------------IVIPKEVSNLEITFANAELLDIQQNSLGY------ELDIDNQIYKVAQLNKDYRWQSTTWASEQEVPQIVQ----GFESSAYASDKVQSIYTLLNANGTFYLFKVSHNGQDKTITFDVFGNIV-------------------------------------------------------- |
4 | 7jmnP | 0.08 | 0.07 | 2.82 | 0.50 | EigenThreader | | TNPENGDW---ELTDAALSLSVAVPASSPSATSSSGSGAPFVHLAWA----------PSVHTSSFELAAIDAPGRITIFLFTQNINKPYLSRKWDTDPVDDLHAVVGCYWLLVCVTTNGLLKMLFPQNLESVTASHAAIGADRNTL---IALAMGSKQLR--------------------VVR-VGIQWWDPEQQQSDGDAPIAQLTHLEPSPLGETPQTVLPPVILAVRSYLPQEGSLYAAHQ----EPFTVIDRTDQPKAFHPAFEQLGAKNSAS-SQPSAMQTLIPGKVVVTVNTLQFGRVVCFGFSDGTLQYRDRFTMNQ-----WETEGPCLQMAFAPT-NCSFVQVSEDGSVK---WVKLRYPVDDPNMTLQGPKLKAVAASLAVAS---VGANIAGPNI-----HNHCDDVMAIARPLAK |
5 | 2bk1A | 0.11 | 0.09 | 3.31 | 0.43 | FFAS-3D | | --IIDSVNDRTYPGALQLADKAFVENRPTILMVKRKPININIDLGAIDELVSKWNEKYSSTARTQYSESMVYSKSQISSALNVNAKVLENSLGV-DFNAVANNEKKVMILAYKQVSADLPKNPSDLFDDSKGVSNEAPPLMVSNVA-YGRTIYVKLETTSSSKDVQAAFKALIKNTDIKNSQ-QYKDIYENSSFTAVV-----LGGDAQEHNKVVTKDFDEIRKVIKDNATFSTKNPAYPISYTSVFLK--DNSVAAVHNKTDYIETTSTEYINLDHSGAYVAQFEVA-----WDEVSYDKEGNEVLTHKTWDGNYQDKTAH-------------YSTVIPL--EANARNIRITGLAWEWWRDVISEYDVPLTNNINVSIGTTLYP---GSSITYN------------------------------- |
6 | 6f1tg | 0.08 | 0.07 | 2.69 | 0.90 | SPARKS-K | | ------------------------LTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNNEDAPH-------EPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGVYTACRHGSKAGISEMFEGQGPITGIHCHAAVGAFSHLFVTSSF--------------DWTVKLWSTKN-----NKPLYSFEDNA------GYVYDVMWSPTHPALFACVDGMGRLDLWN--LNNDTEVPTASISVEGNPALN---RVRWTHSGREIDSEGQIVIYDVGEQIAVPRNDEWAR |
7 | 2ghsA | 0.12 | 0.06 | 2.00 | 0.90 | CNFpred | | -----------------------------------------------------------------------------------------------------------VLDETPMLLGEGPTFDP------------SGTAWWFNIL--ERELHELHLASGRKTVHALPF------------MGSALAKIS---SKQLIASD-----DGLFLR-----DTATGVLTLHAEL---ESDLPGNRSNDGRMHPS--------------GALWIGTMGRKAET--GAGSIYHVAKGKVTKLFADIS-IPNSICFSPD----------GTTGYFVDTK--NRLMRVPLDA-KAEVFIDSTGIKGGMDGSVCDA----------------------GHIWNARWG------EGAVDRYD--------------- |
8 | 5cskA | 0.07 | 0.05 | 1.98 | 0.67 | DEthreader | | SNVAHMVVALKELS--------------------------------------------------TVAKSGNDRYT--IIG-GSPVI-GTKPYKFSLVSTLENIL-KGYDNQ--MNASLQLIVLLPEIKYLAHEHSIFVFLYY-E-N-PN--NILLKHYQPLC--LSS--------KVSAIFSPLIVELESKATAALQREILIQGALPSVKVDFKDGSY-TD--NEVTDTSNYKALMGTT---FP-FRASS--W--FS-DVKLTDDFFIS----P--NAIGMVAFITVKTPEYPR-----------GRQFVVVANDGSFEDENKVTEYARKR----GIPRIYLAIAGTSRAYHD------IFTIGQRAMNGVWAGQEPGQHNSAKTAQANDFNNGEQ----------DADYKQPIIIVVDPTINA-QR |
9 | 6vbu9 | 0.06 | 0.05 | 2.30 | 1.05 | MapAlign | | --------LGDKEEFDQGCLCLADVDNTGNGQDKIIVGSFMGYL-------------------RIFNPHPAQAEDLLLQVEVGKFVSGTEMLHLAV-------------LHSRKLCVYSVSGTLGNVEHGNQYQIKLMYMTYGSFGVKGRDLICIQSVDGMLMVFEQESYAFGRFLPGSLLPGPLAYSSRTDSFITVSSCHQVESYKYQVLAFAVVDWTLNIGEQAIDICIVSFIQSASSVFVLGERNFFCLKDNGQIQFMKKLDYSPSCFLPYCSVSEGTINTLIGNHNNMLHIYQDVTLKWATQL------------------------PHVPVAVRVGCLHDLKGVIVTLSDDGHLQCSYLNKDLKVSAMVSPNSVTVKVTLKNRVALQKIKLSIYVQPPLVLTGDQFTFEFMAPEMTRTVGFS |
10 | 1vw1A | 0.10 | 0.10 | 3.59 | 0.80 | MUSTER | | SKDMTPEQSNVYRDNSYQQFDTNNVRRVNNRYAEDYEIPSSVSSRKDYGWGDYYLSMVYNGDIPTINYKAASSDYISPKLRIIHNGYEGQKRNQCNLMNKYGKLGDKFIVYTSLGVNPNNSSNKLMFYSGNTSGLNQGRLLFHRDTTYPSKVEAWIPGAKRSLTNQNAAIGDDTDSLNKPDDLKQYIFMTDSKG-TATDVSGPVEINTAISPAKVQIIVKAGGKEQTFTADKDVSIQPSPSFDEMNYQFNALEIDGSGLNFINNSASIDVTFTAFAEDGRKSFSIPVTLKVSTDNALTLHHNENGAQYMQWQSYRPQLGKGFYATFVIPPYNLSTFKLYIKHVVDNNSHIIYSLTDTNINITLFIPLDDVPLNQDYHAKVYMTFKKSPSDGT--WWGPHFVRDDKGIVTINPKSILTHFESVNVLNN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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