Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCSSSCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCSSSCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHCCC MEGEPPPVEERRRLQEELNEFVESGCRTLEEVTASLGWDLDSLDPGEEEAAEDEVVICPYDSNHHMPKSSLAKHMASCRLRKMGYTKEEEDEMYNPEFFYENVKIPSITLNKDSQFQIIKQARTAVGKDSDCYNQRIYSSLPVEVPLNHKRFVCDLTQADRLALYDFVVEETKKKRSDSQIIENDSDLFVDLAAKINQDNSRKSPKSYLEILAEVRDYKRRRQSYRAKNVHITKKSYTEVIRDVINVHMEELSNHWQEEQEKAEDDAEKNEERRSASVDSRQSGGSYLDAECSRHRRDRSRSPHKRKRNKDKDKNCESRRRKERDGERHHSHKRRKQKI |
1 | 1vt4I3 | 0.03 | 0.03 | 1.80 | 0.52 | CEthreader | | EENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 2xcoA | 0.07 | 0.07 | 2.79 | 0.77 | EigenThreader | | LDRILNNNEIRQMITAFGDVDGAHIRTLLLTFFYRFMRPLIEAGY-VYIAQPPLYKLTQKQKYYVYNDRELDKLKSE------SMNADQLWETTMN----PEHRALLQVLKPVHRRILYGLNEQGMTKSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMAQITLELNLLANGASGGMATNIPPHNLTELINGVLSLSKN----PDISIAELMEDISGIRRAYETGRDKKIDGKDANASVILNNLYKQTLVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQQRFKLSEKQAQAILDMRGLERDKIEAEYNE |
3 | 6v92R | 0.11 | 0.09 | 3.28 | 0.74 | FFAS-3D | | ---KPRSSAQLEQLLYRYRAINKLEIKAIEDTFRNISRDQDIYETKLDTLRKSI------DKGFQYDEDLLNKHLVALQLLEKDTDNAKAKSLGLESKFSNATKTA--LGDPDTEIRIISNRINELERLPANLGTYSLDDLSSRMDTFKIKALVELKSTKQKSIRQKLINNVASQAHHNIPYLRDSPFTA---AAQRSVQIRSKVIVPQTVRLAEELERQQLEKRKKE-----RNLHLQKINSIIDFIKERQSEQWSRQERCFQFGRLGASLHNQM--------------------------------------EKDEQKRIER------TAKQRLAAL |
4 | 6xnsA | 0.11 | 0.09 | 3.32 | 0.73 | SPARKS-K | | ---------DRSDHAKKLKTFLENLRRHLDRLDKHIKQLRDILSENPEDE--------------RVKDVIDLSERSVRIVKTVIKIFEDSVRKLLKQINKEKSP------DPEDLKRAVELAEAVVRADPGS-------NLSKKILRAAAELAKLPDPDALAAAARAASKVQQEQP-GSNLAKAAQEIMRQASRAAEEAEKDGDPETVARALNQIATMAGSEAQERAARVASEAARLAERVLELAEELQEKVLDILLDILEQILQTATKIIDDANKLLEKLRRSERKD--------------PKVVETYVELLKRHERLVKQLLEIAKAHAEAVEGGS- |
5 | 4watA | 0.10 | 0.06 | 2.10 | 0.63 | CNFpred | | NRTFKKMMDEYNTKKKKLIKCIKNHENDFNKICMDMKYGTNLFE----------QLSCYNNNFCNTIRYHYDEYIHKLILSVKSKNLNKDLS---------------------DMTNILQQSELLLTNLNKKMGSYIY------------IDTIKFIHKEMKHIFNRIEYHTKII----------NDKTKIIQDKIKLNIWRTF--QKDELLKRILDMSNEYSLFITSD------HLRQMLYNTFYSKEKHLNNIFHHL-------------------------------------------------------------------------------- |
6 | 4bujB | 0.04 | 0.03 | 1.37 | 0.67 | DEthreader | | SDEDLGQ-DHKPGSAPQLNQLVNLADDQKRSE------VNHQSLLAWQKFPLAILSWSKLSKYDARILCQYYLLTKE----------SNIQAKMGKGIIFI-ERKNWAEWFRALNLWRQAKVYIKHKQENVKCA-KL--QSI----------------------------GDYT--AKAELRSNN--F-------------------IEWFQGLGAYSVFDATFAQYLKVCQEAAT--Q--KDTIER--FKVDTLPNK-PDNELANRLIGFIKGALSQGIISESSMKHQFELLSI-LESDTKE------------------------------------ |
7 | 2zjaA | 0.08 | 0.08 | 3.04 | 0.87 | MapAlign | | VDELRVDERIKSTLKERASGKTLIAEIAMVHRILTQGGKAV-----------YIVAMAGKYDIIIATAEKFDSLLRGFVTWEDGSIDRFSSWEELVYDAIRKKKGALIFVNRRKAERVALELSKLAKAIRGGVAFHHAGLAVVATPSTVEEILKFITYSLEEKIRNILYFLLEMFKDKMEEVVKDPNPIGIFHLISLTPDITPFNYSKREFERLEEEYYEFKDRLYFDDPYISGYDPYLERKFFRAFKTALVLLAIYRIVETAEWLVYSLKEIAKDYLETLRVRVKYGIREELIPLMQLPLVGRRRARALYNSGFRSIEDISQARPEELLKIEGIGVKT |
8 | 3tnfB | 0.11 | 0.11 | 3.81 | 0.67 | MUSTER | | YEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKYKTYEENLEGFEKLLTDSE----------ELSLSEINEKMEAFSKDSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVE--HEGQFYLL---------QKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEKEKGEEVTSKDQQLFNLGGKHKEQKILEKDQGEDWESPEKQKKAEHDFHKLQYETPMTVKKLVHHNKGLET |
9 | 2vy4A | 0.95 | 0.10 | 2.90 | 1.82 | HHsearch | | --------------------------------------------------GSDEVVICPYDSNHHMPKSSLAKHMASCRLRKMGYTK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 6imuA | 0.08 | 0.08 | 3.05 | 0.51 | CEthreader | | ---EPSCRFAHQYTQEQVLQNPSKFINDVLFWEGKF-HQNNISYNSGNGMSYDGTNIDWVTGEGTVKHPFSAASKESLQVMLYAHAIAGSADAARFLSPNNPSAAPGIAASIMDTKLQTYLRFNETYPGFGGFLPWFTSSSQDLTPTWDWNNRVPGLDNGELLWAVYAFIQAAENTSNKSFIDLAKKWQTWMDYTKTTAAHIF--YQGEGKVCAVTDIKNQSLPVYHPEQTYACEGTSYLNDPYEGELFTWWLQFFGGLSDADIEALWEYKRPQLVSVDYHIGNVGPITVQKGYWFSSHETWKVLEMPYYDIDIIRRVFQNAERARTCNSVVTQVPGMF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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