Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCSSCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCSSSSCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCSSSSSSSSCCCCCCCCSSSSSCCCCSSSSSSSSSSSSCCCCSSSSCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCSSSSCCCCCHHHCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FDSSSEEEEEEVRVVPVTSYNWLTDFPSQEALDSFYKHYVQNAIRDLPCTCEFVESFVDDLIEACRVLSRQEAHPQLEDCLGIGAAFEKWGTLHETQKFDILVPIVPPQGTMFVLEMRDPALGRRCGCVLVESECVCKREKLLGDVLCLVHHHRDPSAVLGKCSSSIKAALCTGFHLDVCKTVQWFRNMMGNAWALVAHKYDFKLSLPPSTTSCKLRLDYRSGRFLSIHLVLGVQREDTLVYLVSQAPDQEQLTSVDWPESFVACEHLFLKLVGRFAPENTCHLKCLQIILSLRQHQSLPHGASRPILTSYHFKTALMHLLLRLPLTDWAHNMLSQRLQDILWFLGRGLQQRSLHHFLIGNNFLPLTIPIPKTFRNAEPVNLFQHLVLNPKAHSQAVEEFQNLLTQVKTLPHAPLAAAP |
1 | 4nxtA | 0.17 | 0.13 | 4.14 | 1.00 | DEthreader | | ----------------DLKKSRLRMSLQ-EKLLTYYRNRAAIPAGEQARAKQAAVDICAELRSFLRAKLPD-MPLRDM-YLSG-SLYDDLQV-VTADHIQLIVPLVLEQNLWSCIPGEDTMNVPGFFLVRRENP-EY------------FP--------R--GS-SYWDRCVVGGYLSPKTVADTFEKVVAGSINWIGSLLDVIRPAPPPE-ALTLEVQYERDKHLFIDFLPSVTLGDTVLVAKPH-RLA--QYDNLWRLSLRPAETARLRALDQADS--GCRSLCLKILKAICKSTP-----ALGHLTASQLTNVILHLAQEEA--DWSPDMLADRFLQALRGLISYLEAGVLPSALNP------------------KVN-------------------------------------- |
2 | 4woyA | 0.15 | 0.12 | 3.93 | 2.14 | SPARKS-K | | --------------------------TFQERLLAFERKHVITPEAHVTLAKQLAGDIALELQAYLRSKFPE---LPFGALVPGGPLYDGLQAG-TAEHVRLLAPLELEPGLSLVPGVDTVAAEPRCWAVRRT----------------------QLEFHPRG--CSPWDRFLVGGYLSSRVLLELLRKALSASWPAIGSLLGCLIWPD--VASEELLLKVQECLEFTLAVLMVVPGATDDRLLLA-WPLEGLA-SNLWLQDLYPVETARLRALDDQDA--GTRRRLLLLLCGICRGHPA-----LVRLGWSHLTQVVLHLGE--EEVAWTEEALGERFLQALEFLVGSLEQASLPCHFNPSVNLLGNFR--------------------EEEIDDIGYVLYSGLQVPESLF-------- |
3 | 4woyA | 0.16 | 0.12 | 4.05 | 1.26 | MapAlign | | ---------------------------FQERLLAFERKHVITPEAHVTLAKQLAGDIALELQAYLRSKF---PELPFGALVPGGPLYDGLQA---GTHVRLLAPLELE-PGLWSLVPGTVAAEPRCWAVRRTQ------------------------LEFHPRGCSPWDRFLVGGYLSSRVLLELLRKALSSVWPAIGSLLGCLIWPD--VASEELLLKVQECLEFTLAVLMVVPGADDRLLLAWP---LEGLASNLWLQDLYPVETARLRALDDQD--AGTRRRLLLLLCGICRG-----HPALVRLGWSHLTQVVLHLGE--EEVAWTEEALGERFLQALEFLVGSLEQASLPCHFNPSV------------------NLLGNF--REEEIDDIGYVLYSGLQVPESL--------- |
4 | 4nxtA | 0.16 | 0.13 | 4.21 | 0.89 | CEthreader | | -----------------DLKKSRLRMSLQEKLLTYYRNRAAIPAGEQARAKQAAVDICAELRSFLRAKLPD---MPLRDMYLSGSLYDDLQVVT-ADHIQLIVPLVLEQNLWSCIPGEDTIMNVPGFFLVRREN-----------------------PEYFPRGSSYWDRCVVGGYLSPKTVADTFEKVVAGSWPAIGSLLDYVIRPAPPPEALTLEVQYERDKHLFIDFLPSVTLGD---TVLVAKPHRLAQYDNLWRLSLRPAETARLRALDQAD--SGCRSLCLKILKAICKSTPA-----LGHLTASQLTNVILHLAQEEAD--WSPDMLADRFLQALRGLISYLEAGVLPSALNPKVNLFAELT---PEEIDELGYTLYCSLSEPEVLL------------------------- |
5 | 4woyA | 0.16 | 0.12 | 4.12 | 1.61 | MUSTER | | --------------------------TFQERLLAFERKHVITPEAHVTLAKQLAGDIALELQAYLRSKFPE---LPFGALVPGGPLYDGLQAG-TAEHVRLLAPLELEPGWSLVPGVDTVAAEPRCWAVRRT--------QLE----------------FHPRGCSPWDRFLVGGYLSSRVLLELLRKALSASWPAIGSLLG--CLIWPDVASEELLLKVQHCLEFTLAVLMVVPGASTDRLLLAWP--LEGLASNLWLQDLYPVETARLRALDDQ--DAGTRRRLLLLLCGICRGH-----PALVRLGWSHLTQVVLHLGEE--EVAWTEEALGERFLQALEFLVGSLEQASLPCHFNPSVNLLGNFR-EEEIDDI--GYVLYSGLQVPESLF------------------------- |
6 | 4woyA | 0.15 | 0.12 | 3.93 | 3.23 | HHsearch | | --------------------------TFQERLLAFERKHVITPEAHVTLAKQLAGDIALELQAYLRSKFP-EL--PFGALVPGGPLYDGLQAG-TAEHVRLLAPLELEPGLSLVPGVDTVAAEPRCWAVRRTQL--------E-------------FHPR-G--CSPWDRFLVGGYLSSRVLLELLRKALSASWPAIGSLLGCLIWPDVASEELLLKVQHE-CLEFTLAVLMVVPGATDDRLLLAW-PL-EGLASNLWLQDLYPVETARLRALDDQ--DAGTRRRLLLLLCGICRGHPA-----LVRLGWSHLTQVVLHLGEE--EVAWTEEALGERFLQALEFLVGSLEQASLPCHFNPSVNLLGNFR-EEEI--DDIGYVLYSGLQVPESLF------------------------- |
7 | 4woyA | 0.13 | 0.10 | 3.54 | 2.61 | FFAS-3D | | ----------------------------QERLLAFERKHVITPEAHVTLAKQLAGDIALELQAYLRSKFPE---LPFGALVPGGPLYDGLQA-GTAEHVRLLAPLELEPGLWSLVPGVDTVAAEPRCWAVRRTQL-----------------------EFHPRGCSPWDRFLVGGYLSSRVLLELLRKALSASWPAIGSLLGCLIWPDVASEELLLKVQ-HECLEFTLAVLMVVPGTDDRLLLAWPLEGL---ASNLWLQDLYPVETARLRALDDQ--DAGTRRRLLLLLCGICRGHP-----ALVRLGWSHLTQVVLHLGEEEV--AWTEEALGERFLQALEFLVGSLEQASLPCHFNPSVNLLGNFR--------------------EEEIDDIGYVLYSGLQVPESLF-------- |
8 | 7bujA | 0.15 | 0.11 | 3.72 | 1.20 | EigenThreader | | ------------------------PDK-----LKKVLDKLRLKRKDISEAAETVNKVVERLLRRMQ---KRESEFKGVEQLNTGSYYEHVKISAPNEFDVMFKLEVP---RIELQEYY----ETGAFYLVKFKR--------------------------IPRGNPLSHFLEG-EVLSATKMLSKFRKIIKEEVKEIKDIDVSVEKEKPGSPAVTLLIRNPE--EISVDIILALESKEPFYLVPKNAKDGNSFQGETFSHTEKYILNN---------HGICCRKECLKLMKYLLEQLKKEFQELDA-FCSYHVKTAIFHMWTQDPDSQWDPRNLSSCFDKLLAFFLECLRTEKLDHYFIPKFNLF-----------SQELI-------DRKSKEFLSKKIEYERNN-------GFPIFD |
9 | 4woyA | 0.16 | 0.12 | 3.99 | 2.23 | CNFpred | | --------------------------TFQERLLAFERKHVITPEAHVTLAKQLAGDIALELQAYLRSKFP---ELPFGALVPGGPLYDGLQAGT-AEHVRLLAPLELEPLWSLVPGVDTVAAEPRCWAVRRTQLEFH--------------------------GCSPWDRFLVGGYLSSRVLLELLRKALSVNWPAIGSLLGCLIWPDV--ASEELLLKVQECLEFTLAVLMVVPGATDDRLLLAWPLE--GLASNLWLQDLYPVETARLRALDDQD--AGTRRRLLLLLCGICRGHPA-----LVRLGWSHLTQVVLHLGEE--EVAWTEEALGERFLQALEFLVGSLEQASLPCHFNPS------------------VNLLGNF--REEEIDDIGYVLYSGLQVPESLF-------- |
10 | 4k8vC | 0.17 | 0.12 | 3.86 | 1.00 | DEthreader | | --------------------------S-PDKLKKVLDK-LRLKRKDISEAAETVNKVVERLLRRMQKRES--EFKGVE-QLNT-GSYYEHVKISAPNEFDVMFKLEV---PRIELQEYY--ETGAFYLVKFKRIP----------R-G-N----------------PLSHFLEGEVLSATKMLSKFRKIIKEEVKEI-KDIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESKGEPFYLVPKNAKDGNSFQGETWRLSFSHTEKYILNNHGKTCCEKCCRKECLKLMKYLLEQLKKE-FQELDAFCSYHVKTAIFHMWTQDPQDQWDPRNLSSCFDKLLAFFLECLRTEKLDHYFIP------------------KF--------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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