Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPGHNGAWETSGGHGIFGSQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSGESGIQNSET |
1 | 7jjvA | 0.31 | 0.16 | 4.90 | 1.40 | SPARKS-K | | SNGQAGASGLAGGPNCNGGKGGKGAPGVGTAGGAGGVGGAGGTGNTNG-----------GAGGSGGNSDVAAGGAGAAGGAAGGAGTG-----------GTGGNGGAGKPGGAPGAGGAGTPAGSAGSPGQTTVL--------------------------------------------------------------------------------- |
2 | 3bogA | 0.33 | 0.09 | 2.78 | 1.24 | CNFpred | | ------CKGADGAHGVMGCPGTAGAAGSGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGR----------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 1vt4I3 | 0.33 | 0.33 | 9.88 | 1.09 | MUSTER | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 4yy8A2 | 0.09 | 0.09 | 3.38 | 0.61 | CEthreader | | KKAYFGSAVLNNFLYVFGGNNYDYKALFSNLNIPRRNNCGVTSNGRIYCIGGYDGSSIIPNVEAYDHRMKAWVEVAPLNTPRSSAMCVAFDNKIYVIGGTNGERLNSIEEQFPYALLEARSSGAAFNYLNQIYVVGGIDNEHNILDSVEQYQPFNKRWQFLNGVPEKKMNFGAATLSSYIITGGENGEVLNSCHFFSPDTNEWQLGPSLLVPRFGH |
5 | 3qnqA | 0.08 | 0.08 | 3.12 | 0.57 | EigenThreader | | RFLEKYVAEQRHLLAIRDGLVLTNIMALIAVFGIAYRLGEVDALASGALSLVTFLLATIPAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAAVTWTTPILFSGYLGSGGKISG |
6 | 6edoA | 0.33 | 0.33 | 9.86 | 0.86 | FFAS-3D | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-- |
7 | 1vt4I3 | 0.33 | 0.33 | 9.88 | 1.27 | SPARKS-K | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 6x99A | 0.06 | 0.04 | 1.86 | 0.67 | DEthreader | | WTALP------------QLATGPAAGTSDARRAVRLAAAWARCLL-PLGPIVCISP------------PLAIFTGIALAGNP-AETASPAGRPIPLIAETG----------GQ--NAMIVQVVGDVITAFDAGQALRVLCLQE-VADILTLKGALEIIELLHVIVVNTYGLGGPKGPLYLGRLV--TTAP---RILGPFAGPL------------- |
9 | 1gyhA | 0.07 | 0.06 | 2.67 | 0.79 | MapAlign | | -LWAPDIYQHKGLFYLYYSVSAFGKNTSAIGWNAIAPAIIADDHGQVWMSFGGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKGDYYY-----------LFASWGLCCRKGDSTYHLVVGRSKQVTGPYLDKTGRDMNQGGGSLLIKGNKRWVGLGHNSAYTWDGKDYLVLHAYEAADNYLQKLKILNLHW------ |
10 | 1vt4I | 0.33 | 0.33 | 9.88 | 1.09 | MUSTER | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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