Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCSCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSSCCCCCHHHHHCCCCCCCCCCCCCCCCCCSSCCHHHHHHHCCCSCCCCCCCCCCCCCSCCCCHCHHHHHHHCCCCCCCCCCCCCSCCCCCCC MAAVAVLRNDSLQAFLQDRTPSASPDLGKHSPLALLAATCSRIGQPGAAAPPDFLQVPYDPALGSPSRLFHPWTADMPAHSPGALPPPHPSLGLTPQKTHLQPSFGAAHELPLTPPADPSYPYEFSPVKMLPSSMAALPASCAPAYVPYAAQAALPPGYSNLLPPPPPPPPPPTCRQLSPNPAPDDLPWWSIPQAGAGPGASGVPGSGLSGACAGAPHAPRFPASAAAAAAAAAALQRGLVLGPSDFAQYQSQIAALLQTKAPLAATARRCRRCRCPNCQAAGGAPEAEPGKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRFACPECGKRFMRSDHLAKHVKTHQNKKLKVAEAGVKREDARDL |
1 | 1vt4I3 | 0.07 | 0.07 | 2.87 | 1.07 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------- |
2 | 3nowA | 0.05 | 0.05 | 2.22 | 0.72 | EigenThreader | | NCVSTAQFCLQTILNALSGLKNKPDSKPDKELCTRNVYSITDRTISGAARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYLCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEVDFINKRITVLANEGITTALCALAKTESLIARVLNAVCGLGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSIRPLLNLLQQDCTALENFESLMALTNLASMYLMEDHLYLTRAAAQCLCNLVCAGALAIITSVSVKCCEKILAIA |
3 | 2ebtA | 0.56 | 0.14 | 3.98 | 1.24 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN------------------ |
4 | 6zywY | 0.09 | 0.08 | 2.92 | 1.18 | SPARKS-K | | LANLYLSIIIGFNEVMQLITKDYKNMTEEFIQDYIFQKVSKVYAGFQIPITLDKIQIKIDFKLTPYFFMVRIEQKNIKSQILNNTVQEGCYLLLTKEIPYFDLWNCQNDYSEKIEKMKKRILWE----PLGKQISDELPKNRIFVQTGRKSNYGFDIPIMQETQRLGWFILFFKEMKEIQITQKMNHTWLIFKVD------SNITFNSISKDTIALEFTGDALEQSFFKIKNYFEENQIKYEYQVDIPAIQFFISYIESKQLMILNQMKDLKLSAYKNLQMQISQAITPVENHIGLVNGSYCSGK-----------------------------------RKFAENLIRFGSDNNLRLHLYKFDLNEMSELTE--KSYLSGLLKFASEKKIQNTDVIV |
5 | 6wmiA | 0.33 | 0.10 | 3.02 | 2.23 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HFKYHLKTHR--------DRSFICPAEGCGKSFYVLQRLKV-EKPFMCHESGCGKQFTTAGNLKNHRRIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVHSGEKPHQCQVCGKTFSQSGSRNVHMRKHH------------------- |
6 | 4f5cA | 0.07 | 0.05 | 1.93 | 0.67 | DEthreader | | -----SSISNKERVVTVIAHELAHQ----------------------------------NLKDLIVPGDVVSGAIYLRAMDRWTLQMGFPVI-VISQ-------R-------------VP-IS--S--------------------IKNGVMQDHYNDLFKTASDD------------------------------------WRIQHQLINQVIYDSFLVPLLDLVPMKKRKEPFQHF-TL-------PENLMDQYSEINAISTCSTCAIWDFAWGQLQQ-------AQLVNEADLRSALACSNEVWLLNRYLGYTLNPIRKQDATSISIANIGQPLAWVQSNWKKLFQDYGSFSFSNLIQGV---VGFGGTRALEQALEKTKANIKWVKENKE---- |
7 | 1vt4I3 | 0.07 | 0.07 | 2.85 | 1.71 | MapAlign | | -GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------- |
8 | 5v3jE | 0.21 | 0.14 | 4.45 | 1.38 | MUSTER | | ------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECG---------------------KAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHKPHKCKECGKGFISDSHLLRHQSVHTGETPECGKGFRRGSELARHQRAHSGDKPYKCK--ECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKYECKECGKTFGRGSEL |
9 | 2ebtA | 0.55 | 0.14 | 3.98 | 1.25 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN------------------ |
10 | 2nbiA1 | 0.17 | 0.15 | 4.81 | 1.18 | SPARKS-K | | --------------QPSDLNPSSQPSECLEECPIDECFYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATENPMFTPSPDGSPPICSPTMLPNQPTPPAPSDCGEVECPLLPTSDPARPPDCTAVGRPDCDVLPFPACCPFECSPDNPMFTPSPDGS---PPNCSPTMLPTPQPSTPTVITSPAP-------SSQPSQCAEVIEQECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFE------CRPDNPMFTPSPDGSP---PICSPTMM-PSPEPSSQP------SDCGEVIEECPIDACFLPKSDSARPPDC-----------TAVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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