Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCSSSSSSSSCCCCSSSSSHHHCCHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCHHHHHCCCSSSSSSCCCHHHHHHHHHCHHHHHHCCCCCCCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCCSSSSCSSSSSSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NEVSFGIEVRGEDLTVALQAEELTLQQLGTVGLWQFLHGQCPGTCFQESSTLKTGHIRPAVGLRFEVGPGAAVHSPLASQNGFLHLLLHGCDLELLTSVLSGLGPFLEDEEIPVVVPMQIELLNSSITLKDDIPPIYPTSPGPIPITLAMEHVVLKRSDDGVFHIGAAAQDKPSAEVLKSEKRQPPKEQVFLVPTGEVFEQQVKELPILQKELIETKQALANANQDKEKLLQEIRKYNPFFEL |
1 | 6v81A | 0.08 | 0.07 | 2.97 | 0.74 | CEthreader | | DPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHK-------WLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLGLKPSTNDTIEIGSKDGLLSLALFQTDTDDEIVVDSSTYKNAGKTRRQGAELAWDQRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNY |
2 | 4u33A | 0.07 | 0.07 | 2.78 | 0.70 | EigenThreader | | EVVPVSAAVWREFVFHGQFTPDRVTGVPRGLRDPLLAAAAALRTPGDPADYPLRPLARFGAWYEMFPRSTGGHGTFATAAAEGFDVVYLPPIHPIGAIGSGTIDDFDDFVSAARDLGMEVALDLALQCAPDHWFTELPDGTIAYDIYPLNVKFFRVDNPHTKLFLSEAFTPPARQYGLAKLELADYRRPNTPDILHAVLQHNGPGMFAIRAVLAATMSLDQPFITRLNIIRRLHPAFQQLRTI |
3 | 2khoA2 | 0.15 | 0.07 | 2.50 | 0.54 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------KDVLLLDVTPLSLGIETVMTTLIAKNTTISTAEDNQSAVTIHVLEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNED--------EIQKMVRDAEANAEADRKFDELV-QTRNQGDHLLHSTRKQ------ |
4 | 4dvyP | 0.11 | 0.11 | 3.85 | 0.67 | SPARKS-K | | HDWNATVGYKNVATLINVHMKNIAGGEKGINNPSFYLYKEDQLTGSQRALSQEEIRNKVDMEFLAQNNTKLDNLSE--KEKEKFQNEIEDFDSKAYLDALGNDRIAFVSKKDTKHSALITEFNNLSYTLKDYNVTLQG-SLKHDGV------MFVDYSFNKVAVFNLPDLNNLAIFVRRNLENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAVAEAKSTQKDLEKSLRKREHLEKE |
5 | 2e5yA | 0.11 | 0.05 | 1.94 | 0.62 | CNFpred | | -----------------------------------------------------------TIHVSVVTP-----GPVYEDDVEMVSVKAKSGELGILPG----------------HIPLVAPLEISAARLKKG----------GKTQYIAVSGGFLEVR-PDKVTILAQAAERA----------------------------EDIDVLRAKAAKERAERRFKRAELALKRAMNRLSVAEMK--- |
6 | 1o1dA | 0.07 | 0.05 | 2.04 | 0.67 | DEthreader | | -------------------------V-H---------------PKQSFVEPAVLNSGFCVTGESSRRSYHIFTAIIAVYEMFL-DIAG----F-EI--FDFN-SFEQL-------CINFTNLQFNGLCNFQKPKP----EAHFSLVHYA--------NDTVSFRLNMANLSTHPH-GCFSRVYSLLGGDRLEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVHWPWMLFF-- |
7 | 6v81A | 0.03 | 0.03 | 1.83 | 1.00 | MapAlign | | NLANAKLGVDESKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYD----TRKTIKQTQAGLRYERSLSSR-DDMSVMMYAGERETTQYHAGGVITL--------QRHYQGIDPVTFTNMSENRKGYNNFREYGQKGELRRDERNLMLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNL- |
8 | 5cwpA | 0.11 | 0.10 | 3.58 | 0.46 | MUSTER | | SDEEEARELIERAKEAAERAQEA-AERTGDPRVRELARELKRLAQEAAEEVKRDPSSNEALKLIVEAIEAAVRALEAAERTGDPEV--RELARELVRLAVEAAEEVQRNSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEA----AEEVQRNPSSEEVNEALKKIV--------------KAIQEAVESLREAEESPEKREKARERVREAVERAEEVQRDPSGWLE- |
9 | 6f1tX2 | 0.10 | 0.03 | 1.06 | 0.83 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHIIESLQAEIKMLSDR---KRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQE |
10 | 3jacA | 0.07 | 0.07 | 3.00 | 0.66 | CEthreader | | IDVTVTLKLGGYEPLFTMSAQQPSIVPFTPQAYEELSQQFDPYPLAMQFISQYSPEDIVTAQIEGSSGRAQMKQELYNGTADITLRFTWNFQRDLAKGGTVEYTNEKHTLELAPNSSVVIPHLFPKYIRAPNGPEANPVKQLQPDEEEDYLGVRIQLRREQVWVIELQDCKADCNLLPMVIFSDKVSPPSLGFLAGYGIVGLYVSIVLVVGKFVRGFFSEISHSIMFEELPCVDRILKLCQDI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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