Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC IILKGSGQQAPSNVSGGLLVHRQTPNGNSLFGNSSSSPVAQPVTVPFNSTNFQTSLPVHNIITSPISAPKTTDGLRQAQIPGLLSTTLPGQDSGSKVISASLGTAQPQQEKVVGSSPGHPAVQVESHSGGQKRPAAKQLTKGAFILQQLQRDQAHTVTPDKSHFRSLSDAVQRLLSYHVCQGSMPTEEDLRKVDNEFETVATQLLKRTQAMLNKYRCLLLEDAMRINPSAEMVMIDR |
1 | 6hqaB | 0.08 | 0.06 | 2.35 | 0.61 | CEthreader | | VEFHPNSTYLFTGSSDKTARMWDIARGECVRVFMGHSGAINCLAVSPDGRWLASAGEDSVVCLWDISTGRRIKAMRGHGRSSIYSLAFSREGTVLVSTGADNSV--------------------------------RVWDVKKNTNSPSAQPEPINDVTAQGIQKKTEDLRRRKEIVATNDHMSVYFTKKTPVYTVHFTRRNLCLAGGVF--------------------------- |
2 | 5nnpA | 0.08 | 0.08 | 2.98 | 0.57 | EigenThreader | | EQILKKNPKHGDTMSMKALILNAQGKTEEAFALAKEALTIDMK-------------SYICWHVYGILYRTNKNFDEAIKAYKFALKLEPESHQIQRDLAVLQIQMRDYAGYVQSRLNMLKARPQIRQNWTALAIAYHLEGNLEKAEHILTTYEKSLTTPPPKTDLEHSEALLYKNTIIAERGD---IERALQHLETDCLAVMELRASYLSKLDEAAKAYRALLDRNPEHMDYYKGLI |
3 | 6dkmB | 0.27 | 0.07 | 2.07 | 0.52 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------DEDDELERLLEYHVLREYEKLLEELRRLYEEYEEESDRILREIKEILDKSERLWDLSEE------------- |
4 | 5yfpH | 0.10 | 0.09 | 3.47 | 0.85 | SPARKS-K | | WMELNTTTGKPLQMDLVLIADKSRDKQNDFIVSQCYPLKDVTVTQEEFSTKRLL-FKFSNSNSSLYECRDADECSRLLDVIRKAKDDLCDIFHVEEIRESFRYLQSTQQTPGRENNRSPNKNKRRSMGGSITPDMSSTAQRLKFLDEGVEEIDIELAR------LRFESAVETLLDIESQLEDL-SLMLLNLISLKIEQRREAISSKLSQSIKSGTENMIKLGLPEQALDLFLQNRS |
5 | 4wicA | 0.11 | 0.03 | 1.22 | 0.47 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------GLELIKKLDKEQKEVA----FHVNNFTHLVTTLGMA--------LYKEGHQKNDEAMLGMHTPITMLSDQVRVLILYLIDEIVHA----------- |
6 | 6qk7A | 0.07 | 0.06 | 2.39 | 0.67 | DEthreader | | DVLIFVCEFPEFTSEVDSLRQVAFINDIVGVLLDTDNLSRI-ALLDIQDITPTLITIVEVYKIVL----------------YE--TRDGTV-KFPQLVRDFRVELVSVVLIYPRHRINCSSFLQDV-VKLG-----L---L--NQM-YTDAAVAYE-MLG------RWREAMSI-A--------KFPEEVESVAEELISSLTFEHYALKA-GGIIAELLADCKGQNSQRLQSVGRLE |
7 | 2pffB | 0.07 | 0.07 | 2.92 | 1.03 | MapAlign | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQDVWNRADNHFKDTGFSILDISATQFTQPALTLMEKAAFEDLKSKLVEVVFYRGMTMQVAVPRDELGRSNY-- |
8 | 5xn7A1 | 0.10 | 0.10 | 3.71 | 0.56 | MUSTER | | LLVQEGFEVRST-----ILLDNPQQKSIERFILANFDNFEQPDELFLVDNKSHHDGRTRILARKANVELSVTELLDAAHVSGKVRGESYQQVIDALTEYHASTAEHADYELTSVEKLLNLRKQVEGYVLGHPDSGRVQAALLNQVNSRLEAVSVLVVSEQSIKAHSFSHLYDQLDNANLKESKHLKGKGNLANIDKLGGSDAVLEKVKAAVSHEYGQVVADTIFAGLSANDLAKDGK |
9 | 1vt4I3 | 0.18 | 0.10 | 3.17 | 0.82 | HHsearch | | -----------------------------------------------------------------------EYALHRSIVDYNIPKTFDS-------------------DDLIPPY---LDQYFYSHIGHLKNIE--HPERMFLDFRFEQKIR-HDSTA-WNASGSILNTLQQLKFYKPYICDN---------DPKYERLVNAILDFLPKICSKYTDLLRIALMAEDEAFEAHQVQR |
10 | 1vt4I3 | 0.07 | 0.07 | 2.94 | 0.56 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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