Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCC MTSDCSSTHCSPESCGTASGCAPASSCSVETACLPGTCATSRCQTPSFLSRSRGLTGCLLPCYFTGSCNSPCLVGNCAWCEDGVFTSNEKETMQFLNDRLASYLEKVRSLEETNAELESRIQEQCEQDIPMVCPDYQRYFNTIEDLQQKILCTKAENSRLAVQLDNCKLATDDFKSKYESELSLRQLLEADISSLHGILEELTLCKSDLEAHVESLKEDLLCLKKNHEEEVNLLREQLGDRLSVELDTAPTLDLNRVLDEMRCQCETVLANNRREAEEWLAVQTEELNQQQLSSAEQLQGCQMEILELKRTASALEIELQAQQSLTESLECTVAETEAQYSSQLAQIQCLIDNLENQLAEIRCDLERQNQEYQVLLDVKARLEGEINTYWGLLDSEDSRLSCSPCSTTCTSSNTCEPCSAYVICTVENCCL |
1 | 6yvuB | 0.15 | 0.11 | 3.60 | 1.33 | FFAS-3D | | -------------------------------------------------------------------------------------IEERMGQIENLNEVCLEKENEKNSLESGKETALEFLEKEKQLT----LLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENM---LEELRGQQTEHETEIKDLTQLLEKERSILDDIKTKNISAEIIRHEKELEPWDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSL------------------------------- |
2 | 6yvuB | 0.07 | 0.07 | 2.94 | 1.08 | MapAlign | | PGLIITRKAFKNNSSKYYINEKESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKPKAEKESDDGLLEYLEDIIGTANYKPLIEERMGQIENLNEVCLEKEKNSLESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGRINGFHGRLGDLGVIDDSFDVAISTACPRLDDVV-- |
3 | 5j1iA | 0.12 | 0.09 | 3.05 | 1.18 | SPARKS-K | | -------------------------------------------------------------------------------------------------SRCQRCISELKDIRLQLEACETRTVHRLRLPLDEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLAAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEATKASLKKLRAQAEAQ------QPTFDALRDELRGAQEVGERLQQRHRDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAEQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLESVIQEYVDLRTHYSELTTLTSQYIKFISET-------------- |
4 | 6yvuA | 0.09 | 0.08 | 3.19 | 1.15 | SPARKS-K | | GTSKYLINGHRAPQQSVLQLFQSVQLNINNPNFLIMQGKITKVLNMKPSEILSLIEEAAGTKMFEDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKHKSKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVS------------YNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVERIKDLKQREDKLKSHYYQTCKNSEYLKRR------------------VTNLEFNYTKPYPNFEASFVHGVVGQLFQIDNDNI |
5 | 2tmaA | 0.12 | 0.08 | 2.72 | 1.12 | CNFpred | | -------------------------------------------------------------------------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRS---------------KQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQK-----------------DEEKMEIQEIQLKEHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKY----EEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI---------------------------- |
6 | 6yvuA | 0.08 | 0.08 | 3.26 | 1.05 | MapAlign | | NTDKSNSPIGFTNSPQISVTRQGTSKYLINGHRAPQQSVLQLFQSVQLNINNPNFLIMQGKITKVLNMKPSEILSLIEEAAGTKMFEDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQARNEEILRDIGECENEIKTKQMSLKKCQEEVSTIEKDMKEYDSSKLNELKKELKLLAKELEEQESESERKYDLFQNLELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNTNLVKTWEKVTLDFGNIFADLLPNSFAKLVPCEGKDVTQGLEVKVKLGNIWKES |
7 | 6jlbA | 0.26 | 0.12 | 3.58 | 1.53 | HHsearch | | -------------------------------------------------------------------------------------------------------IDRVRSLETENAGLRLRIT-ESEEVVSEVSGIKAAYEAELGDARKTLDSVAKERARLQLELSKVREEFKELKARNTK--------------KEGDLIAAQARLKDLEALLNALSTALSEKR-TLEGELHDLRGQVA-------------KLEAALGEAKKQLQDE--LRRVDAENRLQT-KEELDFQKNIYSEELRETKRRHE------TRL-VEIDNGKQR--EFESRLADALQE-------------------------------------------------------------------------------------------- |
8 | 6yvuB | 0.10 | 0.10 | 3.62 | 1.13 | SPARKS-K | | DHKRFLILQGEVENIAQMKPKAEKESDDGLLEYLEDIIGTANYKPLIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSL------KDKTKNISAEIIRHEKELEPWQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGFDVAISTACPRLDNKLGYARFILLDRLRQFNLQPISTPENVPR |
9 | 6yvuA | 0.12 | 0.09 | 3.03 | 1.30 | FFAS-3D | | -------------------------------------------------------------------------------INGHRAPQQSVLQLQSVQGKITKVLEILSLIEEAAKMFEDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFL-EFQSTQTDLEKTEREYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKHKSKLENKE-----------------NGLLNEISRLKTSLSIKVENLND-TTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFD------------------------- |
10 | 5j1iA | 0.15 | 0.10 | 3.37 | 1.09 | CNFpred | | --------------------------------------------------------------------------------------------CQRCISELKDIRLQLEACETTVHRLRLPLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVL-AAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQLPELEATKASLKKLRAQAEAQQPTFD------ALRDELRGAQEVGERLQQRHG-VEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQA-DSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLE------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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