Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCHHHHHHHHHHHCHSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC KSWWNRMSNRFRKLKLMQTLPRGLSSNQPLPFSDEPEPALDSTMRAAPQDKTSRSALPDAAPVTKDNGPGSTRGEKEDTLLTTMLRNGAPLTRLPSDKLKAVIPPFLPPSSFELWSSDRSRTRHNGKADPMKTALPQRASRGHPVGGGGTDTTPVRPVKFPSLPRSPASSANSGNFNHSPHSSGGSSGVGVSRHGGELLNRSGGSIDNVLSQIAAQRKKAAGLLEQKPSHRSSPVGPAPGSSPSELPASPAGGSAPVGKKLETSKRPPSGTSTTSKSTSPTLTPSPSPKGHTAESSVSSSSSHRQSKSSGGSSSGTITDEDELTGILKKLSLEKYQPIFEEQEVDMEAFLTLTDGDLKELGIKTDGSRQQILAAISELNAGKGRERQILQETIHNFHSSFESSASNTRAPGNSPCA |
1 | 4btgA3 | 0.10 | 0.09 | 3.16 | 1.23 | SPARKS-K | | -----GFNLKVKDLGLTQAFAIGELKNQLSVGALQLPLQFTRTSASMTSELLWEAYVYRVGRTA---TYPFDANAVVSSVLTILGRLWSPSTPKELDPSARL----RNTNGIDLFIAYQDMVKQRGRAEVSDEELSSTIIPWFIEAMSEVSPFKLRPI--NETTSYIGQTSAIDHMGQPSHVVQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTRGTVNSNGAEMTLG--FPSVVERDYALDRDPMVAIAALRTGIVDESLEARAHNPEVVVS-EHQGVAAEQGSLYLVWNVRTELRIPVGYNAIEGG----------SIRTPEP--------LEAIAYNKP---IQPSEVLQAKVLDLANHTTSIHIWP---------------------------------- |
2 | 5mzhA | 0.04 | 0.04 | 1.96 | 1.29 | MapAlign | | ---------------KLRKFLLRYYPPGIILQYERVMKQKPIDLLDLTPDVDVEVLLSQIIRQEPLISENRRPALRQLIHRLIDKMFKVLRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTRLITA----SSDKTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDNTCRIWKA--------------- |
3 | 1v38A | 0.21 | 0.04 | 1.22 | 1.28 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGS---------SGRRENHQTIQEFLERIHLQEYTSTLLLNGYTLDDLKDIKESHLIELNIADPEDRARLLSAAESLLSGPSSG------------------------------- |
4 | 5mzhA | 0.09 | 0.07 | 2.74 | 0.66 | CEthreader | | LEFTLFKVLRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTRLITASSDKTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDNTCRIWKALT------------------------------------------------------------------------------------- |
5 | 5lqwQ | 0.05 | 0.05 | 2.21 | 0.70 | EigenThreader | | LEDQERHLMIKTIDRVLYQLGDLTLVVAAPLLIDEDPMVRSTGQEIITNLSTVAGLKTILTVMRPDIENEDEYVRNVTSRAAAVVAKALGVNQLLPFINAACHSRKSWKARHTGIKIVQQIGILLGIGVLNHLTGLMSCIKDCLMDHVPVRIVTAHTLSTLAENSYPYGIEVFNVVLEPLWKGIRSHVLSSFLKAVGSMIPLMDPEYAGYYTTEAMRIIRREFDSDEVESITPKFLREEIAPEFFQKFWVRRVALDRPLNKVVTYTTVTLAKKLGSYTIDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTADLDERLETRLIDALLIAFQEQ--TNSDSIIFKGFGAVTVSLDI--------RMKPFLAPIVSTILNHLKHKTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNII |
6 | 5kcs1w | 0.10 | 0.10 | 3.69 | 0.59 | FFAS-3D | | QAQTRILFHALRKMGIPTIF----FINKI----DQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNVCVTNFTESENDDLLEKYMSGKSLEALELEQEESSLFPLYFYSSTFKIEYTKKRQRLASGVLHLRDSVRVSEKEKIKVTEMYTSINGELCKIDRAYSGENEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISDSDPLLRYYVDSTTHEIILSFLGKVEIEITEPTVIYMERPLKNAEYTIHIEVPPNPFWASIGLSVSPLPLGSGMQYESSVSLGYLNQSGCEQGGLYYSPVSTPADFRMLAPIVLEQVLEPYLSFKIYAPQEYLSRAYNDAPKYCLSGEIPARCIQEYRSDLTFGRSV----CLTELKGYHVTTGEPVCQPRRPNSRID- |
7 | 5jcss | 0.11 | 0.11 | 3.85 | 1.19 | SPARKS-K | | SSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKYMNTKFISLNKGALFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPIISLDIASSRISLFLTQHVPTLENLDDSIKVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTKMLAKKNVSQQTSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKINTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSNLATADTSDLLTEPDSRSILLSEKGDAEPIKHPDFRIFACMNPATDVGKRDLPMGIRS----RFTEIYHSPERDITDLLSIIDKYIGKYSVSDEWVGNDIAELYLEAKKGSNQKRTLTRSLYDGFCMSFLTLLDQKSEAILKPVI |
8 | 2e8oA | 0.18 | 0.04 | 1.41 | 0.62 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGSNTPSAEADWSPGLELHPDYKTWGP-------------------EQVCSFLRRFEEPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLSYIQRLVQIHVDTMKVI--------------------------- |
9 | 4m5dA | 0.05 | 0.03 | 1.38 | 0.67 | DEthreader | | --------Q--IYQPNGSSEYSYNDLPILRISCYRFSIN--LLIGFPYKVF-EP-KLLPNRNCI---------NFSVLSSSTHENYLKYLYKTKKQTE-----------MAALLNGGGI----------NSNKILLHGFSSYQL-----KGVIKYLALILTKM----LGKYNNLL-TFGSMERVK------FITL-------------------------------------------------------------------T------YSNTGGNDFVLVSAQISNEIKHNLPLPCAYSDPDFFQDVISLNKFRVAKYASHTDELAELIAVLKFISALAKVAVNL----------------------------LQTHGLNQQTINLLFTPGL--DL-DPTYQLVKYLNKYLILSL |
10 | 3dlaD | 0.07 | 0.07 | 2.81 | 0.95 | MapAlign | | MNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTESADHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHSASARCLAAYVYAAAGEGESTTDLAWDGQTMIWENGALLAESERFPKGVRRSVADVDLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDPFALQDF-SLFQVLRYGFRPSKIAFLAWHAWNRPSYSLAEIRHWLQIFVQRFYGPKVSHGGALSPRGDWRA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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