Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCSSSCCCCCCCCSSSSSCCCCCCSSSSSCCHHHHHCCCCCSSSSCCCCCCCCCSSSSCCSSSSSCCCCCCSSSSSCCCCCSSSSSSCCCCCCCCCCCCSCCCCCCSSSSSCCCCSSSSSSCCCCCCCCCCCSSSSSSSCCCCCSSSSSSSSSCCCCCHHHHHHHHHHCSSSSSSCCCCCCCSSSSSSSCCCCCSSCSSSSSCCCCCCCSSCCCCCCCCSSSSSSCCSSSSSSSSSSC TLYSMDLMKVHAYVHKVASQMNTLEESIKANLSRENEVVKDSVRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGSKAQDTARGKGKDISKYGSVQKSFADRGLPKPPKEKLLQVEKLRKESGKGSFLQPTAKPRALAQQQAVIRGFTYYKAGKQEVTEAVADNTLQGTSWLEQLPPKVEGRSNSAEPNSAEQDEAEPRSSERVDLASGTPTSIPATTTTATTTPTPTTSLLPTEPPSGPEVSSQGREASCEGTLRAVDPPVRHHSYGRHEGAWMKDPAARDDRIYVTNYYYGNSLVEFRNLENFKQGRWSNMYKLPYNWIGTGHVVYQGAFYYNRAFTKNIIKYDLRQRFVASWALLPDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPAVDDRDEAQPEVIVLSRLDPGDLSVHRETTWKTRLRRNSYGNCFLVCGILYAVDTYNQQEGQVAYAFDTHTGTDARPQLPFLNEHAYTTQIDYNPKERVLYAWDNGHQLTYTLHFVV |
1 | 5a1uG | 0.06 | 0.06 | 2.44 | 0.83 | EigenThreader | | EKLPGLLMTIIRFVIKKLLLVFWEIRKDLQHPN----EFIRGSTLRFLCLLEPLMPAIRACLVRRNAVLAIYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHAN-------------------PSERARFIRCIYNLLQSS---SPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAA---AADVLEFVREAIQRFKSVKIYRGALWILGEYCSTKEDSLGEIPIVESEIKKEAGELMGTYATQSALSSSRPTKKEEDLRGFLLDGDFFVAASLATTLGKSDPVYAEAYVHLVVNQTSDTLQNCTLELAT--LGDLKLVEKPSPLTLAPAANLYARSIFGEDALANVSHIRIRAKSQGMA |
2 | 5amoA | 0.31 | 0.15 | 4.49 | 0.84 | MapAlign | | ---------------------------------------------------------------SNLEERLRACMQKL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGKLTGISDPVTVKTSGSRFGSWMTDAPEGDNRVWYMDGYNNRFVREYKSMVDFMNTDNFTSHRLPHPWSGTGQVVYNGSIYFNKFQSHIIIRFDLKTETILKTRSL--------------DYSDIDLMVD-ENGLWAVYATNQN--AGNIVISKLDP----VSLQILQTWNTSYPKRSAGEAFIICGTLYVTNGYSG-GTKVHYAYQTNASTYEYIDIPFQNKYSHISMLDYNPKDRALYAWNNGHQTLYNVTLF- |
3 | 5yz0A | 0.07 | 0.03 | 1.29 | 0.50 | DEthreader | | ----------------------------------------------IEVD-EYL-GPYAALKMESMEIIEEIQCQ-TQQE---------------NLSSN-SDGISPKRRRMNSISQISLEYSGLKN------------------------KDCQ-----------------------------------------------------------------------------LNTRYKHDLAHVYLWHKFQKTESFITKNIQVSARKAE-------------------------HQALVLQ-----------MEETANFESNAIMYTKYYDKMPM----------FIYQSPRTAFSREFSLINKCLRKDAES--------------------RRRELHIRT----------------------NTAGLPIWFFPTSWYS-------------RSTVMSMVGGLGGIVPFRLMVNGM-GPMGTEG-FR---------VTMRLMRD-R-PLMLKVLEQGVLGHHYQ |
4 | 5afbA | 0.30 | 0.20 | 6.01 | 2.69 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------------------------------------VVRRELSCESYPIELRCPGTDVIMIESANYGRTDDKICDSDNIRCYLPDKIMSQRCNNRTQCAVVAGPDVFPDPCPGTYKYLEVQYECVPYK--------------------------------VEQKVFLCPGLLKGVYQSEHLFESDHQSGAWCKDPLQASDKIYYMPWTPTDTLTEYSSKDDFIAGRPTTTYKLPHRVDGTGFVVYDGALFFNKERTRNIVKFDLRTRIKSGEAIIANANYHDTSPYRWGGKSDIDLAVDENGLWVIYATEQNNGK-----IVISQLNPYTLRI--EGTWDTAYDKRSASNAFMICGILYVVKS-----NKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDNLLYVWNNYHVVKYSLDF-- |
5 | 4wxqA | 0.36 | 0.17 | 5.11 | 0.57 | CEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGELVWVGEPLTLRTATGKYGVWMRDPKYTQETTWRIDTVGVRQVFEYDLISQFMQGYPSKVHILPRPLESTGAVVYSGSLYFQGAESRTVIRYELNTETVKAEKEIPGAGYHGQFPYSWGGYTDIDLAVDEAGLWVIYSTDEAKG-----AIVLSKLNPENLEL--EQTWETNIRKQSVANAFIICGTLYTVSSYTSADATVNFAYDTGTGISKTLTIPFKNRYKYSSMIDYNPLEKKLFAWDNLNMVTYDIKLS- |
6 | 5afbA | 0.32 | 0.21 | 6.32 | 1.87 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------------VVRRELSCESYP------RCPGTDVIMIESANYGRTDDKICDSDNIRCYLPDAYKIMSQRCNNRTQCAVVAGPDVFPD------------------------------PCPGTYKYLEVQYECVPYKVEQKVFLCPGLLKGVYQSEHLFESDHQSGAWCKDPLQASDKIYYMPWYRTDTLTEYSSKDDFIAGRPTTTYKLPHRVDGTGFVVYDGALFFNKERTRNIVKFDLRTRIKSGEAIIANANYHDTSPYRWGGKSDIDLAVDENGLWVIYATEQNNG-----KIVISQLNPYTLRI--EGTWDTAYDKRSASNAFMICGILYVVKS-----NKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDNLLYVWNNYHVVKYSLDF-- |
7 | 4wxqA | 0.36 | 0.17 | 5.17 | 5.48 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC-GELVWVGEPLTLRTATGKYGVWMRDPKPTQETTWRIDTVGTDQVFEYDLISQFMQGYPSKVHILPRPLESTGAVVYSGSLYFQGAESRTVIRYELNTETVKAEKEIPGAGYHGQFPYSWGGYTDIDLAVDEAGLWVIYSTDEAKG-----AIVLSKLNPENLEL--EQTWETNIRKQSVANAFIICGTLYTVSSYTSADATVNFAYDTGTGISKTLTIPFKNRYKYSSMIDYNPLEKKLFAWDNLNMVTYDIKLS- |
8 | 4d77A | 0.29 | 0.14 | 4.12 | 1.47 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPMITSIGNPAQVLKVKETFGTWLRESANRDDRIWVTEHFSGIMVKEFEDLPALLNSS-FTLLHLPHYFHGCGHAVYNNSLYYHKGGSNTIVRFEFGKETPQ-TLKLEDALYFDRKYLFANSKTYFNIAVDEKGLWIIYASSVDGS-----SILVAQLDERTFSVLR--HINTTYPKSKAGNAFIAQGILYVTDTKD---TRVTFAFDLLRGKQINANFGLRMSQSVLAMLSYNMRDQHLYSWEDGHLMLYPVHFS- |
9 | 4rmkA | 0.39 | 0.19 | 5.53 | 4.31 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLCPGLLKGVYQSEHLFESDHQSGAWCKDPLQASDKIYYMPWTRTDTLTEYSSKDDFIAGRPTTTYKLPHRVDGTGFVVYDGALFFNKERTRNIVKFDLRTRIKSGEAIIANANYHDTSPYRWGGKSDIDLAVDENGLWVIYATEQ-----NNGKIVISQLNPYTLRI--EGTWDTAYDKRSASNAFMICGILYVVKSVYE-GNKIDYIYNTDQSKDSLVDVPFPNSYQYIAAVDYNPRDNLLYVWNNYHVVKYSLDFGP |
10 | 6em5m | 0.05 | 0.02 | 0.99 | 0.50 | DEthreader | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NDHVMHRVRKNKLNIDPNSLIELSPKDLRPFPIRCSTILLATGTVRRTTLII-CIEWNPDANGILAVAV-GENIHLIVPIENNGKTIEICITISCKK---TVKKLSWYFVTVQPDSGN-SGIIMDACSQLSKIDIHP--------------RGD-NLIASSFDRVLWHDL----------DLATPYKTLRYH---------------------------SSAAD---D-GTIHVFHATKNPMIVPLKKLTGHKVINLGVLDAIWHPRWLFSAGAD-N-TARLWT-T- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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