Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCSSSSSSCCCCCCSSSSCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC MPRCTYQLEQNPGFLPDGPGVHARAHCQDLSGPYGHEFATSESLGGRVGKTRAPQSGARSRMERAGPAGEEGGAREGRLLPRAPGAWVLRACAERAALEVGAASADTGVRGCGARGPAPLLASAGGGRARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPPLPLEKARGGLSGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEASPSPCITERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMKPMTKEEWDARQSIIRKVVDPETGRTRLIKGDGEVLEEIVTKERHREINKQATRGDCLAFQMRAGLLP |
1 | 5wznA | 0.08 | 0.08 | 3.11 | 0.52 | CEthreader | | AGAATVTHERIETGTGVGVRSVFAGFAGADYAFETYIWIERSSGDVLCEWVPLRECRIDRVLWPAPLSFDRADAHDVTLITHEQGVMIPNSWPTEVGTDAVSFGGRFETAGGYMPWFAQLRSDGHAYIATPWNAGYDIDHPAGGPYTHVGMWFEPSLGRMDYRRVVRYRLLDHADHTAICKTYRAYVNERGRLRTLAEKAARNPSVRDLLGRSWVHVGIKTNVQPDSSFYDPAQPGKNDSLVTFAQRERQMRTLHEMGAGRLYLHLDGWAQPGYDNGHPDYLPACREAGGWKGMKSLIDACHEQGDLFGTHDQYRDYYFAARTFDPRNAIRLADGTMPEHAMWAGGRQTYLCAE-LAPDYVRRNFSEIATHGIVLDCAYLDVFTCNEGDECSHPEHRMTRRECYERRAECFEYLLAHGILT |
2 | 2xpiA | 0.06 | 0.05 | 2.47 | 0.85 | EigenThreader | | REDYLRLWRHDALMQQQYKCAAFVGEKVLDITGNPNDAFWLAQVYCCTGDDLYNRSSACRYLAAFCLVKLYDWQGALNLLGETNPLRGQVYTNLRAKECYKEALMVDAKCYEAFDQLVSNHLLTKLNYAAFLRSLYMLKLNKTSHDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCV----NKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLPYLFLGMQHMQLGLLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSDANVHTAIALVYLHKKIPGLAITHLHESL |
3 | 2akhY | 0.10 | 0.08 | 3.09 | 0.61 | FFAS-3D | | -------------MAK-QPGLDFQSAKGGLGELKRRLLFVIGALIGSFISIFAPYISASIIIQLLTVVHPTLAEIK---KEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTERGI---GNGISIPPAIAHTIEQARQGDLHFLVLLLVA---VLVFAVTFFVVFVERGQRRIVVNYAKRQQGRR---------------VYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQP-------------------LYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVRPGEQ-TAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMS------SQYESAL- |
4 | 6zywY | 0.09 | 0.09 | 3.23 | 1.49 | SPARKS-K | | KLSAYKNLYEQMQISQAITPVENHIGVILVNGSYCRKFAENIRFGSDNNLRLHLYKFDLNEMSELTEKSEKKIQNTDVIVASVPHFIKILIDYFSKSEKISNAFYIRTIATKNINNIYSNFNKNVFTYGVEGQFLLLDTYNNYGVLPGAKIYKIMNNILNPALAKDILTSITFISEQNNLNRLKYSVQYDLLTSNKLPILREKIRDLIYKKILQNGQAIKIDYVKGILRYDSKLKEGLEEITITP-------------NYFIERTVKGVDAKEFTEELNGVSFKNVKYTGITNSIINDNLNKEKLLELLYKLVKPLNKQKL---------RQRKD------LTEEEIVDIQFREGLENGEYDGQF-----WRN-IQGLILPHHPKKDEFIEEYLKQEEVRINQINEQLQQEWETWKQVYDK |
5 | 7jh6A | 0.18 | 0.04 | 1.23 | 0.54 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIFDKGDDDSLEQVLEEIEELIQKHRQLASELPKLELQAIKQYR------EALEYVKLPVLAKILEEEKHIEWLKEAAKQGDQWVQLFQRFRE |
6 | 6reyc | 0.06 | 0.04 | 1.81 | 0.67 | DEthreader | | YELVSIQAR-LI-LLKKKELLSRADL-ELPWRPLY---------------LVSCRPYFPAD--------------------------P-SLPPEHATDNIGYMMGGVVRRLHRERYKKPSWLT----------PVPD-------SH-K-TD-DVTLALMRPVIVTQLTATLS--DFSKCMIFQLVELGS--IGGNPPLKGEPVTNLV-ELQFSHKHFDSWKS--------QV---AQQTFFALGNFCLHDTIGLRDGILKQLKRT-P-LGRSREDM--------E---Q-IFDHFSIFDDAFLIGLIWCITSCVGGLAQLLLLKLTQVYKNVR--------TQGIKLLKTILKWLASAGSTAVTQL-L-------------LLYPHQVPLVLQVLKQTAWARYLEDEQLVREMAATTLSG- |
7 | 5wznA | 0.06 | 0.06 | 2.60 | 0.97 | MapAlign | | FSFAGAATVTHERIETGTGVGVRSVFAGFAGADYAFETYIWIESGDVLCEWVPLRECRIDRVLWPAPLSFDRADAHDVTLITHEQGVMIPNSWPTEVTDAVSFGGRFETAGGYMPWFAQLRSDGHAETPWNAGYDIDHPAGGPYTHVGMWFEPSLGRMDYRRVVRYRLLDHADHTAICKTYRAYVNERGRLRTLAEKAARNPSVRDLLGRSWVHVGIKTNVQPDSSFYDPAQPGKNDSLVTFAQRERQMRTLHEMGAGRLYLHLDGWAQPGYDNGHPDYLPACREAGGWKGMKSLIDACHAPDYVRRNFSEIATHGIVLDCAYLDVFTCNEGDECSHPEHRMTRRECYERRAPVPLYNLVYHDCVIQPWMMRVAGGDDYMPYLNDIERCAVVAGLHRRVLVQRSVFADGTAVTCDFHAQTY |
8 | 5n8oA | 0.18 | 0.18 | 5.70 | 0.79 | MUSTER | | DRRSQMNLKQDERL--SGELITGRRQLLEGMAFTPGSVDQGEKLSNVQSGQRTGTGSALMAMKDAGVNRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ----WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSRPEKMPVADGERTGKIPGLRVSGGDRLQVASVSEDVVPGRAEPASLPVSDSPFTTPGHSVSDSSVTQMAMNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETL------LETAISLQKAGLHT-PAQQAIHLALPVLESKNLAFSM-----VDLLTEAKSTELGGEINAQIKRGDLLYVDVAKGYGT |
9 | 5ng8Av | 0.24 | 0.03 | 0.89 | 0.44 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEII---RSKEFSLKPMDSEEMNLLGHDFFVFTDRETDGTSIVRKDGKLIQT------------------------------ |
10 | 6wknA | 0.07 | 0.07 | 2.86 | 0.48 | CEthreader | | LTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKLLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGPYQPLSRKFTEWCYGPVRVSLYDLSSVDSWEKNSVLEIIAFHCKSPNRHRMVVLEPLNKLLQEKWDRLVSRFFFNFACYLVYMFIFTVVAYHQPFGESMLLLGHILILLGGIYLLLGQLWYFWRRRFMDSYFEILFLLQALLTVLSQVLRFMETEWYLPLLVLSLVLGWLNLLYYTRGFQHTGIYSVMIQK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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