Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560
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| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSCCSSCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCSSSSSSCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCSSSSSCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCSSSSCCCCCCCCCCCCSSSSSSSCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHCCHHHHHHHHHHHCCCCSSSSSHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC MAKPFFRLQKFLRRTQFLLFFLTAAYLMTGSLLLLQRVRVALPQGPRAPGPLQTLPVAAVALGVGLLDSRALHDPRVSPELLLGVDMLQSPLTRPRPGPRWLRSRNSELRQLRRRWFHHFMSDSQGPPALGPEAARPAIHSRGTYIGCFSDDGHERTLKGAVFYDLRKMTVSHCQDACAERSYVYAGLEAGAECYCGNRLPAVSVGLEECNHECKGEKGSVCGAVDRLSVYRVDELQPGSRKRRTATYRGCFRLPENITHAFPSSLIQANVTVGTCSGFCSQKEFPLAILRGWECYCAYPTPRFNLRDAMDSSVCGQDPEAQRLAEYCEVYQTPVQDTRCTDRRFLPNKSKVFVALSSFPGAGNTWARHLIEHATGFYTGSYYFDGTLYNKGFKGEKDHWRSRRTICVKTHESGRREIEMFDSAILLIRNPYRSLVAEFNRKCAGHLGYAADRNWKSKEWPDFVNSYASWWSSHVLDWLKYGKRLLVVHYEELRRSLVPTLREMVAFLNVSVSEERLLCVENNKEGSFRRRGRRSHDPEPFTPEMKDLINGYIRTVDQALRDHNWTGLPREYVPR |
1 | 1kc7A | 0.06 | 0.05 | 2.24 | 1.18 | MapAlign | | --EGNASMRNLLGGKGCNLAEMTIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFA------------------KKTGNPRFAYDSYRRFIQMY----SDVVMEVPKSHFEKIIDAMKEEKGVHFDTDLMNGEEFPQEPKDQLMGAVKAVFRSQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLGVRTPQPIQDMEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQLLASPGAAAGKVYFGERVIEGILTVRGGMTSHAAVVARGMGTCCVSGCEGDYISLDGSTGKIYIMVWADKFRTLKVRTNADT----PEDTLNAVKLGAEGIIPLVGEKKELKFVKDVVVKGSDMQYHIGTMIEIAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEH-GGDPSSVEFCHKVGLNYV--------------------------------SCSPFRVPIARLAAAQAALNN---------- |
2 | 5fwsA3 | 0.28 | 0.05 | 1.38 | 2.39 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------QMPGNLGCYKDHGNPPPLTGTSK-TSNKLTIQTCISFCRSQRFKFAGMESGYACFCGNNPDYWEAASTECNSVCFGDHTQPCGGDGRIILFDTLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 1vt4I3 | 0.07 | 0.07 | 2.78 | 0.77 | CEthreader | | HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------------------- |
4 | 5oqnA | 0.04 | 0.04 | 2.01 | 0.77 | EigenThreader | | NDEEGIFSRFVDQFIRHVLRGVESPDKNVRFRVLQLLAVIMDNIGEIDLINDNNTRPYILERARDVNIVNRRLVYSRILKSMGRKCFDDIEPHIFDQLIEWGLEDREACKRLIAHDWLNALDGDLIELLEKLDVSRSSVKFPES-------IWKDFTNNITEMLEENFPEASKLSEHLNHYILLRYHMLTVVRNMLALTTLSEPLIKIGIRVMKSLSINEKDFVTMAIEIINDIRDDDIEKQEEKEASSATIVLCLTRSSYMLELVNTPLTENTLITPAVRNTAPNIRELGVKNLGLCCLLDVKLAIDNMYILGMCVSKGNASLKYIAL---QVIVDIFSVHGNTVVDGEGKVDFYKVLKNNGLPECQVIAAEGLCKLFLA--DVFTDDDLFETLVLSYFSPINSSNEALVQAFAFCIPVYCFSHPAHQQRMSRTAADILLRLCVLWDDLQSSVIPEVDRK---------PNIIFQQLLFWTDPTKKDTVQLTFLIDVLKIYA------QIEKKEIKKMIITNINAIFLSSEQD------------YSTLKELLEYSDDIAENDNLDNVSKNALD |
5 | 3bfxA | 0.17 | 0.06 | 2.01 | 0.76 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSFEAKPDDLLIC--TYPKAGTTWIQEIVDMIEQNGHPFIEWARPPQPSGVEKAKAM-PSPRILKTHLSTQLPSFWENNCKFLYVARNAKDCMVSYYHFQRMNH------MLPDPGTWEEYFETFINGWFDHVKGWWEMRHQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFNFMRKGTVGDWKNHFTVAQNERFDEIYR---RKMEGTSIN--------- |
6 | 4btgA | 0.11 | 0.10 | 3.51 | 0.82 | SPARKS-K | | LFHHITTDFVCHVLSPLRTATALVDCVRASDLMLTALSSVDSKMLQATFKAKGALAPAANAATTAFERSRGNFDANILGRLWSPSTPKELDPSARLRNTNGIDQLRSNLALFI-AYQDMVKQRGRAEVIFSDEELSSTAMSE---VSPFKLRPINETQTSAIDHMGQPSHV-----------VVYEDWQFAITAFTPQRFLDVEPGISDRMSATLAPIGNTFAVSAFVNRTAVYEAVSQRGTVNSNGAEMTLGFP--SVVERDYA---LDRDPMVAIAALRTGIVDRASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLVWNVRTE--LRIPVGYNAIEGGSIRTPEP---LEAIAYLANHTTSIHIWPWHEASTAYEDAYSVTIRNKR----YTAEVKE----------FELLILKPTVAHAIIQMWYSFVEDDRTLAAARRTSREKLAIDGRRMQNAVTLLRKIEMIGTTGI---GASAVHLAQSRIVDQMAGRGVGINRHRIWAAVLQMMGLLSR--------------------SEAEALTKVLGDSNALGMVVA---- |
7 | 1nstA | 0.14 | 0.05 | 1.66 | 0.87 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLLIIGPQKTGTTALYLFLGMHPDLSS-IQFFNGHNYHKGIDWYMEFFPI-DFYFEKSANYAPRRAAAL-KVLTILINPADRAYSWYQHQRAHDDPVALKYT-----FHEVITA-PGWYATHIERWLSA-NQILVLDGKLLRTEPAKVMDMVQKFLGVTNTI-GFWCQLLEGGKTKCLGKSKGRKYPEMDLDSRAFLKDYYRDHNIELSKL------------ |
8 | 6bcuA | 0.08 | 0.05 | 1.96 | 0.67 | DEthreader | | ----PK---V-LSVVGSITLSHKEIRMEDPDIRYCVLAL---------------FVALNDAITVGRLSSMNPAFVMPFLRKLIQISMLGNLAAKRQVALVLLNFLKT--------------------------KVNIEMLVNDLFNIALTQDI-TQLLNAEFE----AKCRAYINKL-EKLMRELHQQCEKWTL-------------A--AAAAA----WGLGQWDSMEEYTCMI--P--RDTHDGAFYRAVLALLSLAQCIKARDLLDAELAYGAMVSC-------H-M--LSELE-------------EVIQYKLVPE-R-EIIRQIWWRLQCQRIVEDW---------MRTKYASLCGKSGR-----------------SLPLPTVHPQVTYA------------FHMQFVQQQAKQEHKLARCFLKLGEWQLN----------------------LQGINESTIPKVLQYYSAATEHDRSWYKHAW-VM-FE--VPAVQGFFRSISLSRGNNLQNTLANDSLTEVLRKLTGRDTLD----------------------------------- |
9 | 1vt4I3 | 0.08 | 0.07 | 2.90 | 1.13 | MapAlign | | --YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-- |
10 | 5n8oA | 0.10 | 0.10 | 3.55 | 0.71 | MUSTER | | QAKVQFTYTDVLARTVGIL---VIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVRPSLAIVSGQGGAAREQGREVQIIAADRRSQMNLKQDERLSGELITGRRQ---LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITD----SGQRTGTGSALMA--MKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTLRDAQGETQVVRISSLDRLRVTGKIPGLRVSGGDRLMTVVVPLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMNATLNGLALYSSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAIHLALPVL---ESK-MVDLLTEAKSFAA--GTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLSRASYEAEKSILRHILEGKEAVTMERVPGELMET |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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