Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCSCCCCCCHHHCHHHHHHHCCSSSHHHHHHHHHHHHCCCCCSSSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHSSSSSCCCCCCCCCSSSSSSSSC MACEPQVDPGATGPLPPSSPGWSALPGGSPPGWGQELHNGQVLTVLRIDNTCAPISFDLGAAEEQLQTWGIQVPADQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVVVWANIYSTSQMFALGNHWAGMLLVTLAAVSLTLTLVLVFERHQKKANTNTDLRLAAANGALLRHRVLLGVTDTVEGCQSVIQLWFVYF |
1 | 1fehA2 | 0.08 | 0.08 | 3.15 | 0.39 | CEthreader | | YAMKFLNKNGKTIIGAEDEKCFDDTNACPVAALSEKSHMDRVKNALNAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIENNGPCPGWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTSKKFEADRPQMEKDGLRDIDAVIT |
2 | 6lqaB | 0.08 | 0.07 | 2.80 | 0.60 | EigenThreader | | GMQLFGKNYSELRDSDSGLLPRWHMMDFFHAFLIIFRILCG---------------EWIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSEYADKMFTYVFVLEMLLKWVAYGFKKYFTWLDFLIVDVSLVSLVANTLGMRVVVNALVGAIFWLIFSIMGVNLFAGKFGRCINQTEGLTGELYWTKV-K |
3 | 4ry2A1 | 0.14 | 0.07 | 2.55 | 0.67 | FFAS-3D | | ----------------------------------------------------------DKSIMMEYYSHVLKLPMNFFNSIISRFMDASKIRQAI--SGATLTIMIDTIMAVIGGILLY---------IQNSSLFFISFIIILLYGIIVTVFNKPIQNANRQIMEDNAKLTSALVE------------------------- |
4 | 6w2wA | 0.09 | 0.08 | 3.22 | 0.58 | SPARKS-K | | ERVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDPNVVAEIVYQLEVAEHSTDPELILQEALRLAEEQGAEAAARLLEEARQLLSKDPE------------NEAAKECLKAVRAALEAALLALLLLAKAAQDAVQLATAALRAVEAACQLAKQIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVK |
5 | 5yilA | 0.10 | 0.06 | 2.38 | 0.62 | CNFpred | | ---------------------------------------GLKIVYPYDT---------TPFVKISIH---------EVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAGLPPKEATRKSMGQIQGALVGIAMV----------------- |
6 | 4ry2A1 | 0.05 | 0.04 | 1.81 | 0.83 | DEthreader | | ----CVRAC--SIAQYYGL-KMS------LAKIML-------YTQNMM--------V----K------------------AG-FLKP-L-KKTVLCIFLSLLYTALGIAGSFYIKFLFDDLIKFE-KLNDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDKSIMMEYYSHVLKLPIFASIRIDLQPIQTAVSGLELA |
7 | 1e6yE | 0.04 | 0.04 | 2.21 | 0.79 | MapAlign | | SAVWGSYPQTMDLMGGQVQGILSIPQNNEGLGFSLRNIMANHVAAISNRNAMNASALSSIYEQSGIFEMGGAMFERHQLLGLAYQGANNLLYDIVKENDGTIGTVIESVVRRAIEIISVDKTAYNFYKANVPKWNACAAVGTLAATLVNCGAGRAAQNVSSTLLYFNDILEKEGCDYGKVGTFFFSHSIYGGGFVTRHSRF |
8 | 1yk3F | 0.12 | 0.11 | 4.03 | 0.51 | MUSTER | | -GQADDALVRLARERFDLPDQVRRLARPPVPSLEPP------YGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWH-YLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRRIMFDPDHRNTATRRLCEWA-KFLGEHDTTN---RRMALYALEA |
9 | 1vt4I3 | 0.10 | 0.06 | 2.37 | 0.97 | HHsearch | | ------------------------------------------------EYA-LHRSIDHYNIPKTFDSDDLI-PPYFYSHIGHHLKNIEHPERMTLFRM-------VFL-DFRFLEQKIRH-----DSTAWNASG-----SILNTL---QQLKFYKPYICDNDPKYERLVNAILDFLPKIE----ENLICSKYTDLLRIAL |
10 | 6t1zA2 | 0.04 | 0.04 | 1.97 | 0.39 | CEthreader | | ---------------------DNIFQAYKTVLQDKTYMIFMGANIATTFIIMQFDNFLPVHLSNSFKTITYGQRMLTIYLILACVLVVLLMTTLNRLTKDWSHQKGFIWGSLFMAIGMIFLTTTFTPIFIAGIVYTLGEIVYTPSVQTLGADLMNPEKIGSYNGVAAIKMPIASILAGLLVSISPMIKAIGVSLVLALTEV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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