Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAAAAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRFCRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSGLSWPPGGRASGGGGRAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQEQKESKCESCQNGQEELISKSHQLYLGSSSRSNGVIGKQSIGSSISEYSNKPDSILSPHPGEQSGGEESPRSLSSSDLESGNESEWVKDLTATKASLPTVSSRPRDPLDILTKIFPNYRRSRLEGILRFCKGDVVQAIEQVLNGKEHKPDNRNLANSEELENTAFQRASSFSLAGIGFGTLGNKSAFSPLQTTSASYGGDSSLYGVNPRVGISPLRLAYSSAGRGLSGFMSPYLTPGLVPTLPFRPALDYAFSGMIRDSSYLSSKDSITCGRLYFRPNQDNP |
1 | 1vt4I3 | 0.11 | 0.11 | 3.88 | 1.67 | CEthreader | | GSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 4btgA | 0.12 | 0.12 | 4.11 | 1.47 | SPARKS-K | | FNLKVKDLNGSARGLTQAFAIGELKNQLSVGALQLPLQFTRTFSASVGKGPVMYARLFFQYAQAHQSTAAVGKVPPTAILEQLRTLAPSEHE---LFHHITTDFVCHVLSPLGRTATYPNFALVDCVRASDLRR-MLTALSSKMLQATPALISQHLANAATTAFERSRGNFDANSTPKELDPSARLRNTNGIDQLRSNLAGRAEVIFSDEELSSTIIPWF--IEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHAKEITAFTPVKLANNSNQRFLDV--EPGISDRMSATLAPIG-NTFAVSAFVKNRTAVYEAVSQRGTVNSNGAEMTLG-FPS-----VVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHN-PEVVVSEH----QGVAAEQGSLYLVWNVRTELRIP---VGYNAIEGGSIRTPEPLEAIAYNPSEVLQAKV-LDLANHIHIWPWHEASTEFAYEDAYSVTIRNKR |
3 | 2eabA | 0.08 | 0.08 | 2.95 | 1.63 | MapAlign | | --TTLPFGNGKIGGTVWGEVSRERVTFNEETLWTGGPGSSTSYNGGNNETKGQNGATLRALNKQLATTTVKGDTLTVKGALGNNGLLYNSQIKVVLDNGEGTLSEGSDGASLKVSDAKAVTLYQKRELETLVYKYGRYLTIGDPALLDRVYALLKEESHFYVNYMLHKAGSSSGDRLTTGVAYSPEQGPLGTDGNTYESSL--------------VWQMLNDAIEAAKAKGDPDGLVGNTTDCSADNWAKNDSGNFTQIKEWYFEGALGKKKDGSTISGYQADNQHRHMSHLLGLFPGDLITIDNSEYMDAAKT-------------SLRYRCFKGNVLQAIGQRINSWARTGDGNTTYQLVELQLKNAMYANLFDYHAPFQI-----------DGNFGNTSGVDEMLLQSNSTFTDTAGKKYVNYTNSGLVARGNFTVGTTWKNGKATEVRLTSNKGKQAAVKITAGGAQNYEVKNGDTAVNAKVVTNADGASLLVFD----- |
4 | 2nbiA | 0.11 | 0.11 | 3.76 | 1.05 | MUSTER | | LNPSSQPSECADVLEECPILPYSDASRPPSLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCG-----EVIEECPLDTCFLPTSDPA--------------------------RPPDCTAVGRPDCGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDGEVIEECPIDACFLPSDSARPPDCTAVGRPDCNVLPFPN--CCPFECSPDNP--------TPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTCFLPFDDSSRPPDCTDPSVNRPDCDKLSTAI-DFTCPTCCPTQCRPDNPMFSPSPDPPVCSPTMMPSPLPSP |
5 | 4yj0A | 0.82 | 0.10 | 2.86 | 5.41 | HHsearch | | ------------------------------------------------------------------------------------------SPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEEL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 3j3iA | 0.09 | 0.09 | 3.30 | 1.37 | SPARKS-K | | LEMAERKEVDFHVGNHIHVTYAIAPVCDSYDLPGR----CYVFNSKPTSEAHAAVLLAMCREYPPPQFASHVSVPADAEDQGRQIQPGSAVTLNPGLTYAMDTSCACSLQ-ENRYVSLYDLMVPDLSKAVGRVHQMLGMVAAKDIISATHMPSHGIRQYLNSNSRLVTQMASKLTGIGLFDATPQMRIFSEMDTADYADMLHLTIFFLVNGEKLLSADRAGYDVLVEELTLANIRIEHHKM----PTGAFTTRWVAAKRDSALRLTPRS--------------RTAHRVDMVRECDFNPTMNLKAAGPKARLR--GSGVKSRRRVSEVPLAHVFRSPPRRESTTTTDD-----SPRWLTREGPQLTRRVPIIDEPPAYESGRSSSPVTSSISEGTSQEEEMGLFDAEELPMQQTVIATEARRRLGRGTLERIQEAALEGQVTAEKNRRIEAMLSARDPQFTGREQITKMLSDGGLGVREREEWLELVDKTVGVKGLKEVRSIDG |
7 | 4o9xA | 0.03 | 0.03 | 1.91 | 1.42 | MapAlign | | LITLDALGRPITLRFWGTENGKMTGYSSPEKASFSPPSDVNAAIELKKPLPVAQCLTTDRYDHDPEQQIRQQVVFSDGFGRLLQAAARHEAGMARQRNRWAVTGRTEYDNKGQPIRTYQPYFLNDWRYVSNDSARQEKEAYADTHVYDPIGREIKVITAKGWFRRTLFTPWFTVNEDENDTAAEVDPKLYQKTPTVSVYDNRGLIIRNIDFHRTTANGDPDTRITRHQYDIHGHLNQSIDPRLYEAKQTNNTIKPNFLWQYDLTGNPLCTESIDAGRTVTLNDIEGRPLLTVTATGVIQTRQYLSVAEQTPEEKTSRITERLIWAGNDHNLAGQCVRHYDTAGVTRLESLSLTGTVLSQSSQLLIDTQEANWTGDNETVWQNMLADDIYTTLSTFDATGALLTQTDAKGNIQRLAYDVAGQLNGSWLTLKGQTEQVIIKSLTYSAAGQKLREEHGNDVITEYSYEPETQRLIGIKTRRPSDTKVLQDLRYEYDPVGNVISIRND |
8 | 1lpvA | 0.65 | 0.07 | 1.87 | 4.48 | HHsearch | | ----------------------------------------------------------------------------------------SISPRTPNCARCRNHGLKITLKGHKRYCKFRYCTCEKCRLTADRQRVMALQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 4btgA3 | 0.13 | 0.10 | 3.37 | 1.35 | SPARKS-K | | --GFNLKVKDLNGSARGLTQAFAIGLKNQLSVGALQLPLQFTRTFSASMTSELL---------------WEAYVYRVGRTATYPFDAN----------------------------------------------------------AVVSSVLTILGRLWSPS--------TPKELDPSARLRNTNGIDQLRSNLDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSE-----VSPFKLRPINETTSYIGQTSAIDHMGQ--PSHVVVYEDWQFAKEITAFTPVKLANNSNQ-RFL---DVEPGISDRMSATLAPIGNTRGTVNS---NGAEMTLG-FPS-----VVERDYALDRDPMVAIAALRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVV-----VSEHQGVAAEQGSLYLVWNVRTELRIP---VGYNAIEGGSIRTPEPLEAIAYNPSEVLQAKV----LDLANHTTSIHIWP---------------- |
10 | 1vt4I3 | 0.10 | 0.09 | 3.41 | 1.39 | MapAlign | | ----------------------------------------------------LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGTLQQLKFYKPYICDNDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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