>Q5VY80 (246 residues) MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC FILPGI |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLTLQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAMSFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPCFILPGI |
Prediction | CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSSCCCSSSSSCCCCCSSSSCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCSSCCCCSSSSSSSSSSCCCSSSSSSCCCCCSSCCCHHHHHHHHHHHHCHHHHHHHHHHHCCHCHHHHHHHHHHHHHHCCCCCCCCCSSSCCCCCCCCCCCSSSSSSSSCSCCHHHCCCC |
Confidence | 997544289999999999971456667787278889988269999994799999989907775308999256564577642781689998888777788876655554453146554314786114111687236103677518844799728999077377367899999987078999998786070423489998875753246899972663554456889975799999510112431699 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLTLQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAMSFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPCFILPGI |
Prediction | 745322310012212210000124433122000100000014255222101010101432012111734314120411665445610440043044214213233332334333343333122120021344331332221103130002013733412234331432342046345205332110453015104310520463044544262514454443465551302010220014402454 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSSCCCSSSSSCCCCCSSSSCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCSSCCCCSSSSSSSSSSCCCSSSSSSCCCCCSSCCCHHHHHHHHHHHHCHHHHHHHHHHHCCHCHHHHHHHHHHHHHHCCCCCCCCCSSSCCCCCCCCCCCSSSSSSSSCSCCHHHCCCC MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLTLQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAMSFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPCFILPGI | |||||||||||||||||||
1 | 1a6zA | 0.21 | 0.18 | 5.67 | 1.17 | DEthreader | ----------------------------RSHSLHYLFMGASEDLG-LSLFEALGYVDDQLFVFYDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPITMKW---MDAKEFEP--LRYTCQVEHLDQP---- | |||||||||||||
2 | 6xqpC1 | 0.25 | 0.18 | 5.55 | 3.06 | SPARKS-K | ----------------------------RTHSLRYFRLGVSDPIHGVPEFISVGYVDSHPITTYDSVTRQKEPRAPWMAENLAPDHWERYTQLLRGWQQMFKVELKRLQRHYN-HSGSHTYQRMIGCELLEDGSTTGFLQYAYDGQDFLIFNKDTLSWLAVDNVAHTIKQAWEANQHELLYQKNWLEEECIAWLKRFLEYGKDTLQR--------------------------------------- | |||||||||||||
3 | 4s0uC | 0.99 | 0.70 | 19.58 | 0.87 | MapAlign | ----------------------------DPHSLSYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLTLQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAMSFHYISMGDCIGWLEDFLMGM--------------------------------------------- | |||||||||||||
4 | 1a6zA | 0.23 | 0.20 | 6.36 | 0.51 | CEthreader | ----------------------------RSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHV----TSSVTTLRCRALNYYPQNITMKW | |||||||||||||
5 | 2qriA3 | 0.21 | 0.17 | 5.31 | 2.56 | MUSTER | -------SIINFEKLGGGASGGGGSGGGGPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAPRYEPRARWMEQE-GPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSGGSHTIQVISGCEVGSDGRLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQAG-EAERLRAYLEGTCVEWLRRYLKNGNATLLRT-------------------------------------- | |||||||||||||
6 | 1frtA | 0.15 | 0.13 | 4.49 | 1.64 | HHsearch | --------------------------AEPRLPLMYHLAAVSDLSTGLPSFWATGWLGAQQYLTYNNLRQEADPCGAWIWENQVSWYWEKETTDLKSKEQLFLEAIRTLENQI---NGTFTLQGLLGCELAPDNSSLPTAVFALNGEEFMRFNPRTGNWSGEWPETDIVGNLWMKQPEAARKESEFLLTSCPERLLGHLERGRQNLEWKE-PPSMRL--KARPGNSGSSVLTCAAFSFYPPELKFRF | |||||||||||||
7 | 6kyuA1 | 0.24 | 0.17 | 5.45 | 2.72 | FFAS-3D | ----------------------------EPHSLRYFDTGVSDPSPGVPRFVSVGYVDGHLIDHYDSETQRTEPRADWFAANTDQQYWDRQTEISRGAEQIFRLDLETLRERYNQSRGSHTWQLMYGCDLLEDGSTRGFRQYGYEGRDFVAFDKDTLTFTAADAGAQITKRKWEQEGTDAERWKFYLENTCIEGLRKYVSYGKDVLER--------------------------------------- | |||||||||||||
8 | 4iiqC | 0.19 | 0.17 | 5.50 | 1.25 | EigenThreader | D--------------------------RRTHSLRYFRLGISEPGYGIPEFISAGYVDSHPITMYNSVSQLE-PRALWMEENLAPDHWERYTQLLRGWQQAFKVELKQLQHHY-NHSGFHTYQRMIGCELLEDGSITGFLQYAYDGQDFLIFNKDTLSWMAMDNVADIIRRVWEANRHELQYQKNWLEEECIAWLKRFLEYGKDALQRTPPEISINWMKNGEFQDTDYLPSQTWVSVELQNGDIYSC | |||||||||||||
9 | 4lcwA | 0.23 | 0.20 | 6.36 | 2.91 | CNFpred | ---------------------------MRTHSLRYFRLGVSDPIHGVPEFISVGYVDSHPITTYDSVTRQAEPRAPWMAENLAPDHWERYTQLLRGWQQMFKVELKRLQRHYNHS-GSHTYQRMIGCELLEDGSTTGFLQYAYDGQDFLIFNKDTLSWLAVDNVAHTIKQAWEANQHELLYQKNWLEEECIAWLKRFLEYGKDTLQRTE-PPLVRVNRKETF--PGVTALFCKAHGFYPPEIYMTW | |||||||||||||
10 | 1mhcA | 0.19 | 0.16 | 5.13 | 1.17 | DEthreader | ----------------------------GSHSLRYFHTAVSRPGRGEPQYISVGYVDDVQFQRCDSIIPRMEPRAPWM-EKERPEYWKELKLKVKNIAQSARANLRTLLRYYNQSEGSHILQWMVSCEVGDMRLLGAHYQAAYDGSDYITLNEDLSSWTAVDMVSQITKSRLESAG-TAEYFRAYVEGECLELLHRFLRNGKEILQRADPPKAHVLRCWLTWQKEDLT-YTCYVH-H--LTE---- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |