>Q5VWX1 (349 residues) MEEEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKL SERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSG EAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNG SEDSGRGRGIRGRGIRIAPTAPSRGRGGAIPPPPPPGRGVLTPRGSTVTRGALPVPPVAR GVPTPRARGAPTVPGYRAPPPPAHEAYEEYGYDDGYGGEYDDQTYETYDNSYATQTQSVP EYYDYGHGVSEDAYDSYAPEEWATTRSSLKAPPQRSARGGYREHPYGRY |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MEEEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGIRIAPTAPSRGRGGAIPPPPPPGRGVLTPRGSTVTRGALPVPPVARGVPTPRARGAPTVPGYRAPPPPAHEAYEEYGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTRSSLKAPPQRSARGGYREHPYGRY |
Prediction | CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 9589999999998534885443277888889999997643024666677887778984157888615656887655778856997149999998798799964666677653211345688876435787189998249757899999999999999739886319999999999986488878888777765666666777787888889999988888899998888899999988888888877888988887899998767776666676655566667888778888887778876677899888877777787777788888888988888888778998889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MEEEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGIRIAPTAPSRGRGGAIPPPPPPGRGVLTPRGSTVTRGALPVPPVARGVPTPRARGAPTVPGYRAPPPPAHEAYEEYGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTRSSLKAPPQRSARGGYREHPYGRY |
Prediction | 7656511540363176055314202311443242035225535656553153366431322241302275245020102012263321430164140201021321344544556346645243642532000101143346402400530052035104364425223500341241202344663443444434224333344443422432323333224333434334433334344343344444443442443322444434434344424442454425334442444444335234344443444254344542544444252344445443315332648 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCSSSSSSCCCCCHHHHHHHHHCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MEEEKYLPELMAEKDSLDPSFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSEDSGRGRGIRGRGIRIAPTAPSRGRGGAIPPPPPPGRGVLTPRGSTVTRGALPVPPVARGVPTPRARGAPTVPGYRAPPPPAHEAYEEYGYDDGYGGEYDDQTYETYDNSYATQTQSVPEYYDYGHGVSEDAYDSYAPEEWATTRSSLKAPPQRSARGGYREHPYGRY | |||||||||||||||||||
1 | 6uebA | 0.05 | 0.03 | 1.54 | 0.67 | DEthreader | LDRSQTRTKICPTYM-LSPGLGLELERISRNALSIYRAVEEGSKLIIKTMCLIPFLVPSKARVCVSNDQIVN-LANIMSTV---S-TNALTVAQHSPDFMSQAVFHYLFSPILKGRV-------------------------------------------DPSLGGMSVEGLSFWREIWLSSQE-----SWI-HALC-QEAGNPDTTLNLFPRFLELFSSSF-GIESILKVTNVHKR--SLESFKSA--R-------YSEGG----------------------ISRMVSGAV-PHFQRL----------------RQLSSLMRQVLG-DTESDDIQRLLKDSLRRT-- | |||||||||||||
2 | 3al0B | 0.08 | 0.06 | 2.48 | 0.65 | EigenThreader | ---------------------------------------------------MRYRPVIGLEIHVQLST----KTKAFCVPNEEMIRFAVKTALALNCKILEEDAGSITRA---------SYSVDMNRCGVPLIEIVTESSPREARVFMEKLRSIVRYLGVSLPDEKAERFMREYGAKVLTSSKELAEFFEECVKVVNRPKDLSNWIMTEVLRELNERNIEITESKLTPQHFADLFKLMDEGKISIKIAKEIFPEVFETGKMPSQIVEEKGLTQINDEKLIEELVKKAMEQNPKAVQDYKSGKKKAAGFFVGYVMRETKGKANPELTNRIIQKLLEGE------------ | |||||||||||||
3 | 4jvyA | 0.36 | 0.19 | 5.71 | 2.08 | SPARKS-K | EATVEYLADLVKEKKHLTLMFSNVERLLDDEIGRVRVALFQTEFPRVEL-PEPAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR--GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPTDELKRKQLMELAIINGTYRPMKS------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 6gauA | 0.07 | 0.07 | 2.78 | 1.11 | MapAlign | -----VRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYAT-----TVNVVLLEDGGVEVADDGRG-------IPVATHASGIPTVDVVMTSTRLEVEIKRDGYEW----SQVYEKSEPLGLKQGAPTTGSTVRFWAERQHISTLLLTLLFRFMRPLYHPHGDASIYDSLVRMAPSRFPNLLANGSGGIAVGMATNIPPHNLRELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRGSIR------MRGVVEVEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDRVGLRIVIEIKRDAVAKVVINNLYK | |||||||||||||
5 | 4jvyA | 0.32 | 0.17 | 5.01 | 1.18 | MapAlign | ATVEYLADLVKEKKHLTLFPSNVERLLDDEIGRVRV--ALFQTEFPRVELPEPAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR--GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGELKRKQLMELAIINGTYRPMKS------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 4jvyA | 0.36 | 0.19 | 5.71 | 1.00 | CEthreader | EATVEYLADLVKEKKHLTLMFSNVERLLDDEIGRVRVALFQTEFPRVELPE-PAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR--GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAGTDELKRKQLMELAIINGTYRPMKS------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 4jvyA | 0.36 | 0.19 | 5.71 | 1.45 | MUSTER | EATVEYLADLVKEKKHLTLMFSNVERLLDDEIGRVRVALFQTEFPRVELPE-PAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR--GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAGTDELKRKQLMELAIINGTYRPMKS------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 4jvyA | 0.37 | 0.19 | 5.70 | 4.97 | HHsearch | EATVEYLADLVKEKKHLTLMFSNVERLLDDEIGRVRVALFQTEF---PRVELPAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR--GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPEGTDELKRKQLMELAIINGRPMKS-------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4jvyA | 0.38 | 0.19 | 5.78 | 1.70 | FFAS-3D | ---VEYLADLVKEKKHLTLFFSNVERLLDDEIGRVRVALFQTEFPRVE-LPEPAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR--GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLAPEGTDELKRKQLMELAIINGTYRPMKS------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 4jvyA | 0.38 | 0.19 | 5.69 | 2.00 | CNFpred | EATVEYLADLVKEKKHLPHMFSNVERLLDDEIGRVRVALFQTEF-PRVELPEPAGDMISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRG--KANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPTDELKRKQLMELAIINGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |