Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCSSSSSHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCSSCSSSSSCCCCCCCCSSSSSSSCCCCSSSSSCCCCCCCCCCCCSSSCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHHHCHCHHHHHCCCCCCC MGNILTCRVHPSVSLEFDQQQGSVCPSESETYEAGARDRMAGAPMAAAVQPAEVTVEVGEDLHMHHVRDREMPEALEFNPSANPEASTIFQRNSQTDVVEIRRSNCTNHVSAVRFSQQYSLCSTIFLDDSTAIQHYLTMTIISVTLEIPHHITQRDADRTLSIPDEQLHSFAVSTVHIMKKRNGGGSLNNYSSSIPSTPSTSQEDPQFSVPPTANTPTPVCKRSMRWSNLFTSEKGSDPDKERKAPENHADTIGSGRAIPIKQGMLLKRSGKWLKTWKKKYVTLCSNGMLTYYSSLGDYMKNIHKKEIDLQTSTIKVPGKWPSLATSACTPISSSKSNGLSKDMDTGLGDSICFSPSISSTTSPKLNPPPSPHANKKKHLKKKSTNNFMIVSATGQTWHFEATTYEERDAWVQAIQSQILASLQSCESSKSKSQLTSQSE |
1 | 2rloA | 0.57 | 0.16 | 4.71 | 1.08 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIPIKQSFLLKRSGNSLKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVK-----------------------------------------VPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ---------------- |
2 | 2xkxA | 0.06 | 0.06 | 2.71 | 1.13 | MapAlign | | YEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNS----IYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLVYLKVAKPSNALSDSYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRASQALSFRFGDVLHVIDADEEWWQARRVHSDSE-TDDIGFIPSSYETVTQMEVHYARPIIILGPTKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEKDIRAHKFIEAGQYNSHLYGTSVQAVRRLQAAEEQARKAFDRATKLEQEFTECFSAIVEGD |
3 | 2rloA | 0.62 | 0.18 | 5.07 | 1.69 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIPIKQSFLLKRSGNLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSAGQA------------------------------------------EENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ---------------- |
4 | 3ue3A | 0.09 | 0.08 | 2.95 | 1.00 | MapAlign | | ----------------------------------------------------TERLEAMRGVISDRHGVPLAISTPIMKIVYTEKSYKRYYPQPQPNAQIIGLTNSEGRGIEGLEMDGEQKIKVSEVIKSIDSRLQYIMYRELTAAGVANNARSATA----IAVDVKTGEILAMTSWPSYNPNDKGGLSNKDAMRNRGAIDMFEPGSTMKPFTVAAALESGQYTPNSIVNTAPGTMRLGWHTIRDTHNYGALTLTGIIVKSSNVGSAKLALSLPKEALPGFGQSSDVESAGLLYQLGTMAYGYGLNATILQEMPLSLHKLDQVPEGRQVLDPKIADQVLMMLEQVTLPGGTAKQAVIPGYRVGGKTGTAHKLRADRKGYSNSEYRALFAGVADPRLAMIVVVENPYGGLVAAPVFAKIMQESLRLLNVPLDKPL------ |
5 | 2rloA | 0.62 | 0.18 | 5.14 | 1.76 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIPIKQSFLLKRSGNSLKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSAS-----------------------------G----SAG----QA----EEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ---------------- |
6 | 4f7bA | 0.07 | 0.06 | 2.52 | 0.72 | CEthreader | | -------------------------------------------------IEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNVTEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPKIDLIRTLNIPVLTVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSLIHVFRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESQGLPAFRYKVPAEILANTSDNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKETASRLKSMI------------ |
7 | 6af0A2 | 0.06 | 0.05 | 2.20 | 0.85 | EigenThreader | | AIRKLL----PPQLLNNIGCFYSQEGKHRLATEFFQAALDSCARISQTENDLD-------IDALLTTIPFNLGR----------SYEYEGDIDKAIETYEQLLSRHSDYTDARTRLAYIKLRRNPNKEGPDAVAKLYQENEVRGLYGWFLSKVNSKKPEQRHYKHTLQSYDKHDRYALVGMGNLHLMAAREMRRETEQDRQKRSAAYNRAVEFFDKALQLDPKNAYAAQGIAIAL-----VEDRKDYKNALQIFIKVRETIQD-------------------AHVYVNMGH-----IYAELRQFSKAIESYEIA---LSKEGKANDAGIISCLGRTWLNKGRAERNLDAYKMALDQAKKAVAVAPDQLHFKFNVAFVQIQIALVLHSM-----RESE-----RNSFQLEEAAEGLEEAIKILDEIAAS-----PSPPYPR |
8 | 4ckgA2 | 0.21 | 0.05 | 1.66 | 0.74 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEPEPSLREGPGGLVMEGHLFKRASNAFKTWSRRWFTI-QSNQLVYQ-----------------------------------------------------------------KKYKDPVTVVVDDLRLCTVKLCPDSERRFCFEVVSTSKSCLLQADSERLLQLWVSAVQSSIASAF----------------- |
9 | 4btgA | 0.11 | 0.11 | 3.83 | 0.99 | SPARKS-K | | TEYHQSTACNPEIWRKLGSSNRAIKADAVKVPPTAILEQLRTLAVCHVLSPLGFAAYVYRVGRTATYRASDLRRMLTALSSVDSK-MLQATFKAKSQHLANERSRGNFDANAVVSSVLTILGRLWGIDQLRSNLALFIAYQDMVKQRGRAEVFSDEELSSTIIPEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQR---FLDVEPGISDRMSATLAPIGNTFAVYEAVSGAEMTLGFPSDRDIAALRARASNDLKRSMFNYYAAVMHYAVAHNP-----EVVVSEHQGVAAEQGRIPVGYNAIEGGSNKPIQPSEVLQAKVLDPWHEASTEFAYEDAYSVTIRNKRGQRRE--------------RVRILKPTIQMWYSWFVEDDRTLAAARRTSRDDAEKLAIDGRRM |
10 | 3fehA | 0.14 | 0.04 | 1.25 | 1.26 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YREGFLWKRGRD-NGQFLSRKFVLTEEGALKYFNRNDAK---EPKAVMKIEHLNATFQPAKIGH------------------------------------------------------------PHGLQVTYLKTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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