Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHSSCCSSSCCCCCCCCCCCCCCCCHHHHHCCHHHHHHSSCCCCCCCCSSSSSSSCCCSSSSSSCCCSSSSSSCCCCCSSSSSCCCCCCCCCCCCCCCCCSSSSSSCCCCCSSSSSSCCCCSSSSSSCCCCCSSSSSSCCCCCCCSSSSSSSCCCSSSSSSCCCSSSSSSCCCCSSSCCCCCCCCCSSSSSSSSCCCCCCSSCCCSCCCCCCCSSSSSSCCCCCSSSSSSCCCSSSSSSCCCCCSSSSSSSCCCCCCSSSSSSCCCCCSSSSSCCCSSSSSSCCCCCSSSSSSSSCCCCCSSSSSSSCCCSSSSSSCCCSSSSSSCCCCCSSCCCCCCCCCSSSSCCCCSSSSSSCCCSSCCHHHHHHCCCCCCCCCCCSSSSSSCCCCCSSSSCCCCCCCCCCCCSSSSSC MAQQQTGSRKRKAPAVEADAESSPSQGLAAADGEGPLLLKRQRRPATYRSMAHYLKVREVGGWGPARLQGFDGELRGYAVQRLPELLTERQLELGTVNKVFASQWLNSRQVVCGTKCNTLFVVDVESGHIARIPLLRDSEARLAQDQQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPSLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVALWRMDPDKFDDTVAWHSEVGLPVYAHIRPRDVEAIPRAIINPSNRKVRALACGGKNQELGAVSLDGYFHLWKAGSALSRLLSIRLPYFRDNVCLTYCDDMSVYAVGSHSHVSFLDLRQDQQNIRPLCSREGGTGVRSLSFYRHIITVGTGQGSLLFYDVRAQKFLEERASATLESSSGPARRKLRLACGRGWLNHNDFWVNYFGGMEVFPNALYTHCYNWPEMKLFVAGGPLPAGLHGNYAGLWS |
1 | 4wjsA | 0.13 | 0.10 | 3.47 | 1.17 | DEthreader | | -----------D--LGSF---KA----------------NFADATENISNTPYRFRI-DQYPNDLLLLITLSAEP-QAI-FK-VHAVSRLAHRIPGGQPILSCQFSVSSRLATGSGDNTARIWDT-DSGTPKFTLKGH-T---------GWVLGVSWSPDGKYLATCSMDT-TVRVWDPESGKQVNQEFRG-HAKWVLALAWQPYARLASASKDCTVRIWLVN----------------------TG-RT--EH--VLSGHKGSVSCVKWGG-TDLIYTGSHDRSVRVWDAV--KGTLVHNFTAHGHWVNHIALSSAAERLVSASDFTMYLWDPTNGSKPVARLLGH-QNKVNHVQFSPDTLIASAGWDNSTKLWNARDKFIKNLRGHVA--------SRLVVTGSKCTLKVWNGKLAMDLPG--HEDEVYAVDWAA--DGELVAS-GGK----DKAVRTWRN |
2 | 5mzhA | 0.13 | 0.11 | 3.69 | 2.13 | SPARKS-K | | RKFLLRYYPPGIILQYERVMKQKPIDLL---------------DLTPDVDVEVLLSQIIRQE------PLISENRRPALRQLIHRLIDKMLFKVAHILPLTNCAFNSGDRFITGSYDRTCKVWNTFTGEEVFTLE-----------GHKNVVYAIAFNPYGDKIVTGSFD-KTCKLWDAYTGQLYYTLK--GHQTEIVCLSFNPQSIIATGSMDNTAKLWDVETGQE---------------------------RATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTG--QCVHVLSGHRGEVSSTQFNYAGTLVVSGSICTSRLWDVRSGRC---LSVKQGHTDEVLDVAFDATKMVSASADGSARLYHTLTGVCQHTLVGHEGKVAFNPQGTRLITASSDKWDCDTGECLQVLEG---HTDEIFSCAFNYEGDFIITGSKDN-------TCRIWK |
3 | 5mzhA | 0.12 | 0.10 | 3.39 | 0.34 | MapAlign | | ----------------------------QYERVMKQKPIDLLDLTPDVDVEVLLSQIIRQEPLISENRRPALRQLIHRLIDKMLEFTLFKVLRA-HILPLTNCAFNKGDRFITGSYDRTCKVWNTFTGEEVFTLEG-----------HKNVVYAIAFNPYGDKIVTGSFD-KTCKLWDAYTGQLYYTLK--GHQTEIVCLSFNPSTIIATGSMDNTAKLWDVE---------------------------TGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVR-TGQCVHVLSG-HRGEVSSTQFNYAGTLVVSGSICTSRLWDVR-SGRCLSVKQG--HTDEVLDVAFDGTKMVSASADGSARLYHTLTGVCQHTLVGHISKVAFNPQGTRLITASSKTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDN------TCRIWKA |
4 | 2h9lA | 0.12 | 0.08 | 2.95 | 0.26 | CEthreader | | -----------------------------------------------------------------SGRENLYFQGTQSKPTPVKPNYALKFTLAGHTKAVSSVKFSNGEWLASSSADKLIKIWGAYDGKFEKTI-----------SGHKLGISDVAWSSDSNLLVSASDD-KTLKIWDVSSGKCLKTLK--GHSNYVFCCNFNPSNLIVSGSFDESVRIWDVKTGK---------------------------CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSPNGKYILAATLNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSGKWIVSGSEDNLVYIWNLQTKEIVQKLQG--------------------------------------HTDVVISTACHPTENIIASAALE-----NDKTIKLWK |
5 | 5mzhA | 0.13 | 0.11 | 3.82 | 1.58 | MUSTER | | ------------KLRKFLLRYYPPGLQYERVMKQKPIDLLDLTPDVDVEVLLSQIIRQE-----PLISENRRPALRQLIHRLIDKMFTLFKVLRAHILPLTNCAFNSGDRFITGSYDRTCKVWNTFTGEEVFTLE-----------GHKNVVYAIAFNPYGDKIVTGSFD-KTCKLWDAYTGQ--LYYTLKGHQTEIVCLSFNPQSIIATGSMDNTAKLWDVETGQERATLAGHR---------------------------AEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTG--QCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEVAFNPQGTRLITASSDKWDCDTGECLQVL---EGHTDEIFSCAFNYEGDFIITGS-------KDNTCRIWK |
6 | 5a1uD | 0.11 | 0.09 | 3.10 | 0.78 | HHsearch | | ----------------------------------------------------------------------------------MPLRLDIKRKLTARSDRVKSVDLHTEPWMLASLYNGSVCVWNHETQTLVKT-----------FEVCDLPVRAAKFVARKNWVVTGADD-MQIRVFNYNTLERVHMF--EAHSDYIRCIAVHPTPFILTSSDDMLIKLWDWDKKSCSQVFEGHTHYSASLDRTIKVWQLSSSPNFTLEGHEKGVNCIDYYSGGDYLISGADDRLVKIWDYQNKTC--VQTLEGHAQNVSCASFHPELPIIITGSEGTVRIWHSSTYRL-ESTLNYG--MERVWCVASLSNNVALGYDEGSIIVTEIKDGERLKDMGSCEIYIQHNPNGRFVVVCGDGEYTAMALRN--------KSFGSAQEFAWAHDSSEYAIRESNSIVKIFKNFKEKFG |
7 | 3jctx | 0.14 | 0.13 | 4.32 | 2.72 | FFAS-3D | | LIPPPSKKQKKEAQLPREVAIIPKDKFQALDTGDNALRVPGAISEKQLEELLNQLNSVPYTFSCTKASDPYSSLIKVFKVKPVT---RSSSAIAGHGSTILCSAFATSSRMVTGAGDNTARIWDCDTQTPMHT-----------LKGHYNWVLCVSWSPDGEVIATGS-MDNTIRLWDPKSGQCL-GDALRGHSKWITSLSWESKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNS----------------------------VSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKTFRGHVASVYQVAWSSDCRLLVSCSKDTWDVRTRKLSVDL---PGHKDEVYTVDWSVDGKRVCSGG-------KDKMVRLWT |
8 | 3jctx | 0.14 | 0.12 | 4.05 | 0.60 | EigenThreader | | STLIPPPSLPREVAIIPKDLPNVSIKFQALDTGDNALR-VPGAISEKQLEELLNQLNGTSVPKASDPYSSLIK---------PQITLLYTPRIAGHGSTILCSAFAPHTRMVTGAGDNTARIWDCDTQTPMHTLKGHY-----------NWVLCVSWSPDGEVIATGSM-DNTIRLWDPKSGQCL----GDAHSKWITSLSWEPIPRLASSSKDGTIKIWD-----------------------------TVSRVCQYTMHTNSVSCVKWGG-QGLLYSGSHDRTVRVWDINSQGRCINILKSHAH-WVNHLSLSTEEMMVTASDDYTMFLWNPLKSTKPIARMTGH--QKLVNHVAFSPRYIVSASFDNSIKLWDGRDGKFTFRGHVASVYQVASSDCRLLVSCSKDTTDVRTR-KLSVP----GHKDEVYTVDWSVDGKRVCSGGK---------DKMVRL |
9 | 5mzhA | 0.14 | 0.10 | 3.56 | 4.83 | CNFpred | | --------------------------------------------------LLSQIIRQE-----PLISENRRPALRQLIHRLID--FTLFKVLRAHILPLTNCAFNKGDRFITGSYDRTCKVWNTFTGEEVFTLE-----------GHKNVVYAIAFNNYGDKIVTGSFD-KTCKLWDAYTGQLYYTLK--GHQTEIVCLSFNPQTIIATGSMDNTAKLWDVETGQERATLAGH---------------------------RAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTG--QCVHVLSGHRGEVSSTQFNYAGTLVVSGSICTSRLWDVRS-GRCLSVKQGH--TDEVLDVAFDGTKMVSASADGSARLYHTLTGVCQHTLVGHISKVAFNPQGTRLITASCRLWDCDTGECLQVLEGH---TDEIFSCAFNYEGDFIITGSKDNTCRIWK------- |
10 | 3jctx | 0.13 | 0.10 | 3.60 | 1.17 | DEthreader | | LPR-E--IIPKDL-PNVS---IK----------------PGAISEKQLEVPYTFSC---DPYSSLKITLLY--TP-RAV-FK-VKPVTRSSSAIAGGSTILCSAFAHTSRMVTGAGDNTARIWDCDTQTPMHTLKGHY-----------NWVLCVSWSPDGEVIATGSMD-NTIRLWDPKSGQCLGDALRG-HSKWITSLSWEPKPRLASSSKDGTIKIWDTV----------------------SR-VC--QY--TMSGHTNSVSCVKWGG-QGLLYSGSHDRTVRVWDINS-QGRCINILKSHAHWVNHLSLSTCEEMMVTASDYTMFLWNPLKSTKPIARMTGH-QKLVNHVAFSPDGYIVSASFDNSIKLWDGRDKFISTFRGHVA--------CRLLVSCSKTTLKVWDRKLSVDLPG--HKDEVYTVDWSV--DGKRVCS-GGK----DKMVRLWTH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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