Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCSCCCSCCSCHHHHCCHHHCCCCCCCCSSCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCHHHHHCCCCCCCCSCCCCCCCSSCCCCCHHHHCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCCCCCCCCCSSCCCCCHHHHHCCCCCCC MPRSFLVKSKKAHTYHQPRVQEDEPLWPPALTPVPRDQAPSNSPVLSTLFPNQCLDWTNLKREPELEQDQNLARMAPAPEGPIVLSRPQDGDSPLSDSPPFYKPSFSWDTLATTYGHSYRQAPSTMQSAFLEHSVSLYGSPLVPSTEPALDFSLRYSPGMDAYHCVKCNKVFSTPHGLEVHVRRSHSGTRPFACDICGKTFGHAVSLEQHTHVHSQERSFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRHRESQHNLK |
1 | 5v3jE | 0.33 | 0.19 | 5.74 | 0.83 | DEthreader | | ------------------------------------------------------------------------------------------------EKCFECKE---------------------------------FMRPS-----H-LLRHQRIHTGEKPHKCKECGKAFRY-DTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE- |
2 | 5v3jE | 0.26 | 0.22 | 6.72 | 1.32 | MapAlign | | ---------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQ-MSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH---- |
3 | 5v3jE | 0.27 | 0.22 | 6.89 | 0.95 | CEthreader | | -------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMS-HTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--- |
4 | 5v3jE | 0.30 | 0.25 | 7.44 | 2.92 | MUSTER | | --------------------------------------------------PHKCKECG-----KAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPS--NAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSH-TGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--- |
5 | 5v3jE | 0.28 | 0.24 | 7.22 | 2.35 | FFAS-3D | | ----------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRH-------------------------QRIHTGEKPHKCKECGKAF--RYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALH-QMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--- |
6 | 1vt4I3 | 0.05 | 0.05 | 2.30 | 1.11 | MapAlign | | SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
7 | 5v3jE | 0.35 | 0.21 | 6.16 | 1.07 | EigenThreader | | -------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHT-DEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEK |
8 | 5v3jE | 0.32 | 0.25 | 7.59 | 1.79 | HHsearch | | -------------PHKC---------------KECGK-----------AFH----TPSQLSHHQKLHVGEKPYKCQECGPSNAQLSRVHTDEKC-----------FEC----KECGKAFMR-----PSHLLRHQRIHTGEKKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQM-SHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--- |
9 | 5v3mC | 0.38 | 0.21 | 6.20 | 8.88 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------SQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHR-VHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDK |
10 | 5v3jE | 0.29 | 0.20 | 6.19 | 5.05 | SPARKS-K | | -----------------------------------------------------------------------------------------------PHKCKECGKAFHTPKLHVGEKPYKCGKAFPSNAQLSLHHRVHTDEKCFFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLT-HAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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