Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC MLACLQRTQNAPGQHLACPSKSLELRKCEAVASAMHSSRYPSPAELDAYAEKVANSPLSIKIFPTNIRVPQHKHLSRTVNGYDTSGQRYSPYPQHTAGYQGLLAIVKAAVSSSSTAAPAGPAKSVLKSAEGKRTKLSPAAVQVGIAPYPVPSTLGPLAYPKPPEAPAPPPGLPAAATAASVIPLPGRGLPLPPSNLPSIHSLLYQLNQQCQAPGAAPPACQGMAIPHPSPAKHGPVPSFPSMAYSAAAGLPDCRKGTELGQGATQALTLAGAAKPAGYADSGLDYLLWPQKPPPPPPQPLRAYSGSTVASKSPEACGGRAYERASGSPLNCGVGLPTSFTVGQYFAAPWNSVLVTPTSDCYNPAAAVVVTELGPGAARELAGPPADALSGLPSKSVCNTSVLSSSLQSLEYLINDIRPPCIKEQMLGKGYETVAVPRLLDHQHAHIRLPVYR |
1 | 3j3iA | 0.09 | 0.09 | 3.42 | 1.08 | SPARKS-K | | IIACLQENRYFSRIGLPTVVSLYDLPAFIAQNSALEGARLDLSKAVGRVHQMLGAAKDIISATSNSRLVTQMASKLTGIGLFDATPQMRIFSEMDTADYADMLH-----LTIFEGPISFLGEKLLSADRAGTLANIRIEHHKMPTGAFTLTPRSRTADMVRECDFNPTMNLKARRVSEVPLAHVFRSPPRRESTTTTDDSPRWLTREGPQLTRRVPIIDEPPAYESGRSSSP---------VTSSISEGTSQHEEEMGLFDAEELPMQQTVIATEARRRLGRGTLERIQEAALEGEVTAEKNRRIETGREQITKMLSDGGLEREEWLELVDKTVGVKGLKEVRSIDGIRRHLFAVVRTLLSGNSKHVRRINQLIRESNPSAFET-EASRMRRLRADWDGDAGSAPVNALHFVGNSLENNNIPSDIQVAGRMCSYLAEVLSHGNSDATKLGRL |
2 | 1vt4I3 | 0.08 | 0.08 | 3.00 | 1.42 | MapAlign | | -GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--- |
3 | 2pffB | 0.20 | 0.17 | 5.54 | 1.01 | HHsearch | | MDAYSTRPLTLSHGSLEHVLLSQLQEQFNKILPEAADDEPTTPAELVKFLGYVSSLVEPSK-------VGQFDQLNLCLTEFENC---YLEGNDIHALAAKLLQENDTTLVK---------TKELIKNY--ITARIMNSALQGNTDDYFEELQTYHVELRTTLDA--EK-----VFTQGLNIL---EWLENPKDYLLSIPPLIGVIQLAHYVTALGFTYLKGA-TGHSQGLVTAVADSFVSVAYP-NTSLPPSILEDSLEEGVPS--PMLSISNLT-QE-QVQDYVNKTNSHLPAKQVEISLVNGAKVVSGPPQSLYGLRKAKAP-SGLDQRIPRKLKFSNRFLVASPFHSHLLVPASDLINKDLVKVSFNA----K-DIQIP--VYDTFDGS-DL---RVLSISERIVDCIIR---LPVKWETTTFKATHILSGLGVLTHRNKGVRNPDDD |
4 | 1vt4I3 | 0.08 | 0.08 | 3.06 | 1.00 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------ |
5 | 4ui9X | 0.08 | 0.07 | 2.92 | 0.65 | EigenThreader | | RLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALL-----PSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTPKINMMLANLYKKAGQERPSVTSYKEVLRQCPLALDAILGLLSLSVKGAEVASMTMNVIQTVPNLDWLSVWIKAYAFVHTGDTICSLEKKSLLRDNVDLLGSLADLYFRAGDNKNSVLKFEQAQMLDPYLIKGMDVYGYLLAREGRLEDVENLGCRLFNISDQHAEPWVVSGCHSFYSKRYSRALYLGAKAIQLNSNSV-----------------QALLLKGAALRNMGRVQEAIIHFREAIRLAPCRLDCYEGLIECYLASNSIREAMVMANNVYKTLGANAQTLTLLATVCLEDPVTQEKAKTLLNKALTQEPDYIKAVVKKAELLSREQKYEDGIALLRNALANQSDCV |
6 | 3cnfB | 0.09 | 0.08 | 3.20 | 0.54 | FFAS-3D | | -------------------EFEFSGRNEKWDQALYLSEHFPA-----LFSDVPLAGANTIIFTPQGFLRTDDLAIAANFPRASRNPQTYIPYTNQRGTVTNEFASMQKATRSCTKQWLRHLETQFDNIAVAHTDHLSVVYATMSNFMLNFTNNFATHVAVVLYQSGVINGPASTYLRENEVLVVMPDYALMPTLSTSQIRHAIERIAQITDVDSTDGTLTRSLKMQNATVLRYDDQIDIEAFRWSRYFLDELQLRRLSVGLRLITNPRIARRFNGVRIMYLTDDDPDYVAVQYAHRLFSSSLANKRNRVTYTHP-PTGMAYPSPTGRPHVHMTINERAGMSKLVADNIIASVIKSN--WVVDILDIEYTAEVMTPSEGYTQHVDAESIMTAPKGKLFHLQFMDGLLRDMRLILQPISVA----RSMRAIVNHNEVDRPREMDTGTLSRNGYS |
7 | 4btgA | 0.14 | 0.14 | 4.65 | 1.05 | SPARKS-K | | AIGELKLPLQFTRTFSASMTSELLWEVGKGNIDPVQAGGALSVNQFTEYHQSTACNPEIWRKLTAYIKVPPTAPLGFILAAYVYRVGRTATYPN----FYALVDCVRASDLRR--------MLTALSSVDSKMLQATFKA-KGALAPALISQHLANAATTAFERSRGNFDANAVVSSVLTILPSTPKELDPSARLRNTIDQLRSNLALFIQDMVKQRGRA---EVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINESYIGQTSAIDHMGQPSHVVVYE-------DWQFAKEITAFTPVKLANNSNQRFLDVEPTLAPIGNTFAVSRTAVYEAVSQRGTVGAEMTLGFPSVVERDYAFNYYAAVMHYAVAHNPEVSEHQGVAAEQGSLYLELRIPVGYNAIPEPLEAIAYLANHIHIWPWHEASTEFAYEDVKEFELLGRERVRILKPTVA |
8 | 1ixhA | 0.12 | 0.02 | 0.87 | 0.28 | CNFpred | | ----------------------------------------------------------------------------------------------------GAIGYVEYAYAK-------NLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQK------GEDAWPITSTTFILIHKD---QKKPEQGTEVLKFFDWAYKTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 7kveB | 0.03 | 0.02 | 1.20 | 0.67 | DEthreader | | ---------VNGTMPDITVCAHDHISGQVLEKVSA-----YF-IAA--EEVIWGKHYKASRPYSNIRTYKWNILLLICKSR--QRAADIE-QQ-AVFA--DEKSWYLENINKENPDEVKRDD--------------FYESNIMSTINGFCSVY--LFPMRGSMNS--WDYSETVPRGEPIIRAEVDD-------LHKDSNMPMDMR-EFVLLFINGMLPGLK-----RIMRDCRM-------ASESKPWIQVDMQK--------NQINWIKYIRI-SPTRA---PTLRLELQGC------------------PLGMENGKIENKQIT---------------------ASSFK----------WEPFR------------AQGRVNAW--EIDLLKIKYSEQVEWKPYR-LK-SSM----VD--KIFENFFNPPI-------ISRFIRVIPK |
10 | 5i2tA | 0.05 | 0.05 | 2.37 | 1.16 | MapAlign | | --KQLLSPVGNRVSVFDLINNKSFTFEYEHRKNIAAIDLNKQGTLLISILVNFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFLQIWKTFVRHRVHAGHFQDITSLTWSQDSRFILTTSKYTVSKDGAVFVWEFTSWRITKKHTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAFSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLALSMRPDGKEVAVSGQISIFNIEDAKQVGNIDCRISKFFTTIHYSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVSRNEVRVTSVQFSPTANAFAAASTEGL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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