Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCSSCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCHHHHHCCCCCCCSSSCCCCC MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEEGEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAAVCRRLDIYARSVRRQHKTPVRDVRDVFGVFNSGKMSSENGDSGMKGAQLSSGASKFPPAAEPGGLQEQAGREEAFNMDSAYSEQAAVLLQRSRPSRGGTSAWGKCSLPKFTVPKGRLGVTRIGDLSLQDMRKVPSLALIELTALCDILGLDLKRSKAGKWKAAETRLFGVPLDSLLEADHKVLPSTQVPLVLQALLSCLEKRGLDMEGILRVPGSQARVKGLEQKLERDFYAGLFSWDEVHHNDASDLLKRFIRKLPTPLLTAEYLPAFAVVPNIPNLKQRLQVLHLLILILPEPNRNALKALLEFLRKVVAREQHNKMTLRNVSTVMAPNLFLHQGRPPKLPKGKEKQLAEGAAEVVQIMVHYQDLLWTVASFLVAQVRKLNDSSSRRPQLCDAGLKTWLRRMHADRDKAGDGLEATPKVAKIQVVWPIKDPLKVPLTPSTKVAHVLRQFTEHLSPGSKGQEDSEDMDSLLLHHRSMESANILLYEVGGNINEHRLDPDAYLLDLYRANPHGEWVLKQNPT |
1 | 3cxlA | 0.14 | 0.09 | 3.08 | 0.72 | CEthreader | | ---------------------------------------------------GVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRFESIHDLVTDGLITLYIETKAAEYIAKMTINPIYEHVGYTTLMPVLKETEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDLKH--------VKKVYSCDLTTLVKAHTT-----KRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDA----MAALNDIRYQRLVVELLIKNEDILF--------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 4fgvA | 0.05 | 0.05 | 2.21 | 1.08 | EigenThreader | | TPLIDTLRTRFLEVLQTGGPGQPHTYDEQLIKMFTEVLTTISNIIPLQMDNSRDQEFIQNLALFLTSFFTMHLPLIENLPNRDFLTHGHFYLIRISQCLDYWLKLVQELYEEMQSLLGMMSGGGAPNPALLEHYPLRKHKYKEVLSNLRVVMIEKMVRPEEVLIVENDEGE---IVREFVKDTDSVQLYKTIRECLVYLTHLDGSEWSWHNCNVLCWAIGSISMAMNFLVTVIKDLLGLTEMKNKAVVASNIMYIVGQYPRFLKAHWKFLKTVVNKLFEFMHESHEGVQDMACDTFIKIAKQCRALQPSENEPFIEEIIRNIGKIT------CDLTPQQVHTFYEACGYMVSA----QGNRNQQERLLAELMAIPNAAWDEIIKAATMNILHEPDTIKIIGNIMKTNVSACSSIGPYFFPQIGRLYNDMLQMYAATSQLISEAVARDGVRGLRTIKKEILKLVETFVEKALKAMTVIITRLQGLMEDQVPAIMENVFECTLDMINKDFAEYPEHRVEFFNLLRAINLYCFPALLK---LDGLNMCLELINNIAEKTDVQTCNAFFNQFFIRILQDVFFVLTDT------DHKAGFKTQSMLLMRLFYFVHPADG------SA |
3 | 3fk2C | 0.21 | 0.07 | 2.09 | 1.72 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNYFGVPLTTVVTPEK------PIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQD-HNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWPTLMRPDFSTMD-----ALTATRTYQTIIELFIQQCPFFF--------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 3cxlA | 0.18 | 0.11 | 3.54 | 1.01 | SPARKS-K | | ------------------------------GVWKYLYQLQQERRITCTCEVENRPKYYGHGMAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQIHDLVTDGLITLYIETKAA---------------EYIAKMTINPIYE-HVGYTTLMPVLKETEKIHNFKVHTFRGPHWCEYCANFMWG--------------------LIAQGVKCADCG------LNVHKQCSKMVPNDC--------------------KPDLKHVKKVYSCDLTTLVKAHTT-----KRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDAM----AALNDIRYQRLVVELLIKNEDILF--------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 5jcpA | 0.24 | 0.11 | 3.45 | 1.27 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIPIIVDACISFVTQHGLRLEGVYRKGGARARSLRLLAEFRRDARSVKLRPGEHFVEDVTDTLKRFFRELDDPVTSARLLPRWREAAELPQKNQRLEKYKDVIGCLPRVNRRTLATLIGHLYRVQKCAALNQMCTRNLALLFAPSVFQTDG------------RGEHEVRVLQELIDGYISVFDIDSDQVAQIDLEV-AIRKKLVIVGCGKTCLLIVNS-------------NYVADIEVD---GKQVELALW-DTAGQEDYDRLRPLSYP----------------------DTDVILMCFSIDSPDSLEIPEKWTPEVKHFCPNVPIILVGNKK |
6 | 6tntA | 0.07 | 0.04 | 1.78 | 0.67 | DEthreader | | ASGNLV-RVGK-------------------------------------------IKFI--LPKEIA-QMLVKWYNVHSA-SEWNLFVTCLMNMGYNTDRSSLFTHIPAIFFVLHLVYEELKICSLVELLVQRVDHYPPSWPPYPRVLALGDES-VSSLEQPASDWRDLSKQEGPDMNHRTLFSYHPVPTEPLPIPKSFNGVAGLKIAPASQI----------------------------ALGLNGHLKGAALGQL-LKWDDILPNSKWVLENLSAFNC--------LHKFAKDFMTYLSAPNASVTGPHNL---------------------------------ET-CLS-VV-L-LSLAMV-M----------------------AGS-G----NLKVLQLCRFLHMK-TGG---EMNYGFHLAHHMALLLSIAALLC-YPHDNRYHLQALRHLY-----------------CY--PLSYKEDPMGWQSLLAQTVANRNSEARAFK------KPQEILDLFS---------SVLYECVTETPEMLPAYMEQIKLVEFFSSHERLN------------------------------------------------------- |
7 | 3cxlA | 0.18 | 0.11 | 3.51 | 1.45 | MapAlign | | ----------------------------YLYQLQQEAPHPRRITCTCEVYYGREFHGMISREAADQLLIVAEGSYTLALRFGSQTRNFRLYYDGKHFVESIHDLVTDGLITLYI---------------------------------------------ETKAAEYIAKMTINPIYEHVGYTTLMPVLKETEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPD-------------LKHVKKVYSCDLTTLVKAH-----TTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRS----PELDAMAALNDIRYQRLVVELLIKNEDILF--------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2mbgA | 0.24 | 0.10 | 3.20 | 0.99 | MUSTER | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMPNLKPIFGIPLADAVERTM-MYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDRE---ESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQIS-------------------NRVLYVFFTHVQELFVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIK----------DLSKEERL----EVQRILTALKRKLREA---------------------------------------------------------------- |
9 | 2mbgA | 0.24 | 0.09 | 2.75 | 2.43 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMPNLKPIFGIPLADAVERTM-MYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDRE---ESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISN-------------------RVLYVFFTHVQELFGNPAFLLNCLHRDLQ-GGIKDLSKEQRILTALKRKLREA------------------------------------------------------------------------------------------------------------------ |
10 | 5c2kA | 0.17 | 0.11 | 3.48 | 0.61 | CEthreader | | ----------------------------------------------------------------AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV--FEMATRAALQARRGKE------------------GMLADFVS-----QTSPMIPSIVVHCVNEIEQRGLTETGLYRIDGCDRTVKELKEKFLRVKTVPLLSKVD-DIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHLQRVAQ-SPHTKMDVANLAKVFGPTIVAHAVPNPDPVTMSQDIK--RQPKVVERLLSLPLEYWSQFMMV--------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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