Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCHHHHHHHHHHHHHHHCCCCCCSSSSCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCSSCCCCHHHHCCCCCSSSSSCCCCCCCCHHHHHHHHHCCCCCCSSSSSCCCCCCCHHHHHHHCCCSSSSCCCSSSSSSSSSSSCC DSKRCRERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANHYYKLFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIFRKWAGNEKNMVIMPGYCVQGTVGHKILSGQRKLEMEGRQVLEVKMQVEYMS |
1 | 2ycbA | 0.28 | 0.28 | 8.62 | 1.50 | DEthreader | | PSRNRAEKELVKTIYSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIDEVPVYIDGM-IWEANAIHTARPEYLSKDLRDQIFGHNPFISDIFHKVNGMRREIGEPSIILSTSGMLTGGNSLEYFKWLCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKKMRVYNVRMNIKTIE |
2 | 6i1dA2 | 0.34 | 0.34 | 10.31 | 2.37 | SPARKS-K | | EPRLNRERKLTQLIHSTVMRGGRVLLPVFALGRAQEIMLILDEYWSQGGGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFRDSNPFIFKNISYLRNLEFQDFGPSVMLASPGMLQSGLSRDLLERWCPEDKNLVLITGYSIEGTMAKFIMLEPDTIPSIPEITIPRRCQVEEIS |
3 | 3af5A | 0.30 | 0.30 | 9.08 | 1.11 | MapAlign | | MPREEAEKRLIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIEVPIYLDG-MIWEATAIHTAYPEYLSRRLREQIFGYNPFLSEIFHPVERDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMGRTEVIKVNMEVHTID |
4 | 3af5A3 | 0.30 | 0.30 | 9.08 | 0.98 | CEthreader | | MPREEAEKRLIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIEVPIYLDG-MIWEATAIHTAYPEYLSRRLREQIFKYNPFLSEIFHPVRQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGTEVIKVNMEVHTID |
5 | 6q55A2 | 0.34 | 0.34 | 10.15 | 2.46 | MUSTER | | EPRIDREKRFLGGVQSIITRKGKCLLPVFAIGRAQELLLILEEHWSRTPQNVPIIYASPMSIKCMRVFETYINQCGESVRRQADLINPFQFNYIKTVNKDIIYNPGPCVVMAAPGMLQNGTSRDIFEIWAPDKRNGIILTGYAVRGTPAYELRKEPEMIQLGEK-VIPMRAKFDQIS |
6 | 6q55A2 | 0.34 | 0.34 | 10.15 | 2.64 | HHsearch | | EPRIDREKRFLGGVQSIITRKGKCLLPVFAIGRAQELLLILEEHWSRTPQNVPIIYASPMSIKCMRVFETYINQCGESVRRQADGINPFQFNYIKTVNSLIIYNPGPCVVMAAPGMLQNGTSRDIFEIWAPDKRNGIILTGYAVRGTPAYELRKEPEMIQLGEK-VIPMRAKFDQIS |
7 | 6q55A2 | 0.34 | 0.34 | 10.15 | 2.46 | FFAS-3D | | EPRIDREKRFLGGVQSIITRKGKCLLPVFAIGRAQELLLILEEHWSRTPQNVPIIYASPMSIKCMRVFETYINQCGESVRRQADLINPFQFNYIKTVNKDIIYNPGPCVVMAAPGMLQNGTSRDIFEIWAPDKRNGIILTGYAVRGTPAYELRKEPEMIQLGEK-VIPMRAKFDQIS |
8 | 6q55A2 | 0.35 | 0.34 | 10.30 | 1.00 | EigenThreader | | EPRIDREKRFLGGVQSIITRKGKCLLPVFAIGRAQELLLILEEHWSRTPSIVPIIYASPMSIKCMRVFETYINQCGESVRRQADLINPFQFNYIKTVNSDIIYNPGPCVVMAAPGMLQNGTSRDIFEIWAPDKRNGIILTGYAVRGTPAYELR-KEPEMIQLGEKVIPMRAKFDQIS |
9 | 3af5A | 0.30 | 0.29 | 8.93 | 1.67 | CNFpred | | MPREEAEKRLIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIEVPIYLDG-MIWEATAIHTAYPEYLSRRLREQIFGYNPFLSEIFHPVRQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVRTEVIKVNMEVHTID |
10 | 2ycbA3 | 0.28 | 0.28 | 8.62 | 1.50 | DEthreader | | PSRNRAEKELVKTIYSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIDEVPVYIDGM-IWEANAIHTARPEYLSKDLRDQIFGHNPFISDIFHKVNGMRREIGEPSIILSTSGMLTGGNSLEYFKWLCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKKMRVYNVRMNIKTIE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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