Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCSSSSSSSSSHHHCCCCCCCSSSSSSSSCCCCCCSCSCCCCSSSCCSSSSCCCSSSSSSSSSCCCCCCCCCSSSSSSSSSSSCCCCCCSSSSSSSSSHHHHHCCCCCSSHHHHHCCCCCCCCCCCCSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCSSSSCCCCCSSSCCCCCCCCCCCCCCSSSSSCC MMKKKKFKFKVDFELEELSSVPFVNGVLFCKMRLLDGGSFTAESSREVVQANCVRWRKKFSFMCKMSASAATGILDPCIYRVSVRKELKGGKAYAKLGFADLNLAEFAGSGNTTRRCLLEGYDTKNTRQDNSILKVLISMQLMSGDPCFKTPPSTSMSIPIAGESESLQEDRKGGETLKVHLGIADLSAKSASVPDELGACGHSRTSSYASQQSKVSGYSTCHSRSSSFSELCHRRNTSVGSTSTGVESILEPCDEIEQKIAEPNLDTADKEDTASEKLSRCPVKQDSVESQLKRVDDTRVDADDIVEKILQSQDFSLDSSAEEEGLRLFVGPGGSTTFGSHHLPNRVGSGAYEQVVIKR |
1 | 5dfzA | 0.06 | 0.05 | 2.24 | 1.10 | EigenThreader | | NISL----FRANGDSKLIKEYGDGFIPCFFILESIRGELL-----------YVSEVQSGSQELPKLTG-----ASTMIVLKLVGLW----------CVLCTYTIDLLQPINEDTVLITGTN--------APVLDLIDGSYTEISSKIEDDFLSLKN------------QNHWYMRTVQKSIETLEKEVLQRKKSKKNIEMAQLESNDTINHSKTELSLMSQDESINDDYGSIYSRFVQIKDRLDQLRFKKLYQLIGIFHSTDLFNSDRGYIYLLRQAGESTKHR-------EYVNSQLGYYLLFLHLTAIQIFKAPLPYRLYGSTSVID-----SQYPLYFTDQMISKHQAKLI-----K |
2 | 6xjbA | 0.12 | 0.11 | 3.94 | 1.19 | SPARKS-K | | QNPSGTYHLAASLNANEVSYIKFLKKPLFENLS---GATVEKLS----LKNVAISGKNDIGSLANEATNGTKIKQVHVDGVLAGERGVGGQSSIAESSFKG-RIVNTYETTDAYNIGGLVGHTGKNASIAKSKATVTISSNTNRSDQTVGGLAGLVDQDAH-----IQNSYAEGDINNVKHFGKGYLWDRTSGEEKHAGELTNVLSDVNVTNGNAITGYGMKVANTFSSKANRVFNVTLEKDEVVSKESFEERGTMLDASQIVSKKAEINPLTLPTVEPLSFSKIAHYQAN--------RALVYKNIEKIVKYGNVKENSLLYQKELLSAVMKDDQVITDIVSNKQTANKHSSEKFDLKY |
3 | 4npjA | 0.21 | 0.07 | 2.11 | 1.13 | CNFpred | | -------SALLILYLDSARNLPS-NPNPVVQMSVG----HKAQESKIRYKTNEPVWEENFTFFIHNPK--------RQDLEVEVRDEQ-----QCSLGNLKVPLSQLLTSMTVSQRFQLS------NSGPNSTIKMKIALRVLH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
4 | 6ei6A | 0.08 | 0.03 | 1.34 | 0.56 | CEthreader | | HCNTDLTDSELEIVVVRGISYNVANVDTYVRVEFPLLNDESFKTKTNVIRDTSPDYDERFKVDIQRTNRQFQRIFKRHGVKFEIYSRGGFLRSDTLIGTVNVKLQPLETKCEIHDTYDLMD----GRKQVGGKLEVKIRVRNPILTKQMEHITEKWLVLDA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 2vzvA1 | 0.07 | 0.06 | 2.47 | 0.83 | EigenThreader | | AAQFSVPWWYRTDLNVDDT-----SSRTYLDFSLSKNGAYTR---------HDLDITAQVVAFKVYPNWAQTPPDQNMGIVRDVLVRRA---VALRS-AHVIQKLNSALDHADLTVKADVRNDSANAAKERKTVTFPLVGLDRPNV----WWPAGMGGQHRIEPDEFFDIADDLGVLTMPGWECCDKWEGQVNGEEKGEPWVESFSEAERLRDHPSVISAPDRRIEQGYLDAMKAADFLLPVIPAASARPSPITG-----ASGMKMNGPYDYVPPVYWYDKSQKDRGGAWHWQLFDAYMDQNGAYYGAKKAN------------EPLHIQYSHNRSVVVINQTSNAPAVSGLSTNVLTDS |
6 | 6ei6A2 | 0.10 | 0.04 | 1.34 | 0.34 | FFAS-3D | | ---------ELEIVVVRGISYNVANPKTYVRVEFPLLNDESFKTKTNVIRDTSSDYDERFKVDIQRTNRQFQRIFKRHGVKFEIYSRGGFLRSDTLIGTVNVKLQPLETKCEIHDTYDLM----DGRKQVGGKLEVKIRVR----NPI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4wa0A | 0.10 | 0.09 | 3.15 | 1.18 | SPARKS-K | | ------------------TSVPSS----PLDYAIFSKGALNT-NKNLTVENGSVYSGGDLTIDGGAVFNIDN---------LISKGEV--------INQD--------SDSRCVRNIIYVEKSLKANRISPRSTNIDAKTIYVGQEQLYGAGSYKFVQLFSDSN---VKLAGPGVNEVSTLASIRGTLEVID--------GATVTLKSNSAVYCNENGAKLYLATTPDASTIISIQNNGGTISYSSSFSYPSPPAEIDEIRNRDYTSGLLTTPLPADSVGSNQLGSTADTSQTPPYGESYINDNEARIEISARLG--SPIVDFST-LQLHLISRGNITFVGGLTINNATGNPYAGLTLKY |
8 | 4p42A | 0.21 | 0.07 | 2.11 | 1.08 | CNFpred | | --------ALLILYLDSARNLPS-NPNPVVQMSVG----HKAQESKIRYKTNEPVWEENFTFFIHNP--------KRQDLEVEVRDEQ-----QCSLGNLKVPLSQLLTSMTVSQRFQLS------NSGPNSTIKMKIALRVLH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
9 | 2pffB | 0.09 | 0.06 | 2.30 | 0.67 | DEthreader | | -----L-L---------------------FI-QAADDETPAELVGKFLGYVSSLVEPSKDLNLFENCYLE-NDALKLKTKEL-----------------IKNYIT-R--PFDKVLVGKLEWLE--SNT-------VAKLLG------------ATHILDFG--SGLGVVDDDKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------GGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--DVMSESLVEVVFYRGMGMGNENVAGDLRALDTVTNVL---------SLEEGHFGGGGGG---------------------- |
10 | 4npjA | 0.07 | 0.05 | 1.94 | 0.97 | MapAlign | | -LRFPVPKGVLRIHFIEAQDLQGKKSDPYGIIRVG-----NQIFQSRVIKENLPKWNEVYEALVYE--------HPGQELEIELFDED--PDKDDFLGSLMIDLIEVEKERLLDEWFTL-------DEVPKGKLHLRLEWLTL-------------------------------MPNASNLDKVLTDIKADKDQANDGLSSALLILYLDSARNLPSGNPNPVVQMSVGHKAQESKIRYKTNEP-----------------------------------------------------------------VWEENFTFFIHNPKRQDLEVEVRDHQCSLGNLKVPLQLSNSGPNSTIKMK-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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