Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSSSCCCCCCCCSSSSSSSSSSSCCCSSSSSSSSSSCCCCCCHHHHHHHHHHHHHHHCCCCCSSSSSCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC NQSRSPPAVVEEKWKPQAQRNSANNTTTSGLTPNSMIPEKERQNIAERLLRVMCADLGALSVVSGKEFLKLAQTLVDSGARYGAFSVTEILGNFNTLALKHLPRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGPDSCYILTAYQAEGNHIKSYVLGVKGADIRDSGDLVHHWVQNVLSEFVMSEIRTVYVTDCRVSTSAFSKAGMCLRCSACALNSVVQSVLSKRTLQARSMHEVIELLNVCEDLAGSTGLAKETFGSLEETSPPPCWNSVTDSLLLVHERYEQICEFYSRAKKMNLIQSLNKHLLSNLAAILTPVKQAVIELSNESQPTLQLVLPTYVRLEKLFTAKANDAGTVSKLCHLFLEALKENFKVHPAHKVAMILDPQQKLRPVPPYQHEEIIGKVCELINEVKESWAEEADFEPAAKKPRSAAVENPAAQEDDRLGKNEVYDYLQEPLFQATPDLFQYWSCVTQKHTKLAKLAFWLLAVPAVGARSGCVNMCEQALLIKRRRLLSPEDMNKLMFLKSNML |
1 | 2bw3A | 0.19 | 0.15 | 5.00 | 1.17 | DEthreader | | -------------------------------------------------------P-SA-VSGSGFIDIKFFIKVKAE--YGEHVNVEELLPSPITLS-RKVTSDAKEKKALIGREIKSAVKDGASATIDLWTDIKRNFLGVTLHYHENNELRDLILGLKSLDFRSTAENIYKKLKAIFSQFNVEDLSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEE--T--PEL-NPILACKNIVKYFKKA-NLQHRLRSSLK--CPTRWNSTY-TLRSILDNWESVIQILSEAGETQRIVHINKSIIQT-VNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIWEELSIWHYTAFFFYPPALH-QQ--EKVAQIKEFCL-SKEDLELIN-RSSFNE-----------------EPPVCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYK |
2 | 2bw3A | 0.16 | 0.15 | 4.99 | 1.82 | SPARKS-K | | ---------------------------SHQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIFFIKVKAEYGEHVNVEELLPSPITLSRKVTSDAKEKKALIGREIKSAVEK---DGASATIDLWTDIKRNFLGVTLHYHENNELRDLILGLKSLDFRSTAENIYKKLKAIFSQFNVEDLSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPEL--------NPILACKNIVKYFKKAQHRLRSSLKSECPTRWNSTYT-LRSILDNWESVIQILSEAGETQRIVHINKSIIQT-VNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWNLSIWHYTAFFFYPPALHQQ---EKVAQIKEFCLSDLELINR--SSFNELSISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYK |
3 | 2bw3A | 0.18 | 0.16 | 5.33 | 2.50 | MapAlign | | ------------------------------------VSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDIKFFIKVKAEYGEHVNVEELLPSPITLS-RKVTSDAKEKKALIGREIKSAVKDGASATIDLWTDIKRNFLGVTLHYHENNELRDLILGLKSLDFRSTAENIYKKLKAIFSQFNVEDLSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEE-------TPELN-PILACKNIVKYFKKANLQHRLRSSLKSECPWNSTY-TLRSILDNWESVIQILSEAGETQRIVHINKSIIQT-VNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWNLSIWHYTAFFFYPPALH-QQ--EKVAQIKEFCLSLELINNELSATQLNQDISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSF-- |
4 | 2bw3A | 0.16 | 0.15 | 5.06 | 1.82 | CEthreader | | ---------------------------SHQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDIKFFIKVKAEYGEHVNVEELLPS-PITLSRKVTSDAKEKKALIGREIKSAVKDGASATIDLWTDIKRNFLGVTLHYHENNELRDLILGLKSLDFRSTAENIYKKLKAIFSQFNVDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPELN--------PILACKNIVKYFKKANLQHRLRSSLKSECPRWNSTYTLRSILDNWESVIQILSEAGETQRIVHINKSIIQT-VNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWNLSIWHYTAFFFYPPALHQQKVAQIKEFCLSKEDLELINRSSLSATQLNQDISTTSFFFPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYK |
5 | 2bw3A | 0.17 | 0.16 | 5.31 | 1.81 | MUSTER | | ---------------------------SHQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDIKFFIKVKAEYGEHVNVEELLPS-PITLSRKVTSDAKEKKALIGREIKSAEKDGASATIDLWTDIKRNFLGVTLHYHENNELRDLILGLKSLDFRSTAENIYKKLKAIFSQFNVEDLSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETPE--------LNPILACKNIVKYFKKANLQHRLRSKSECPTRWNSTYT-LRSILDNWESVIQILSEAGETQRIVHIN-KSIIQTVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWELSIWHYTAFFFYPPALHQQEKVAQIKEFCLSKEDLELINRSSFNELSATQLNQDISTTSFFFPQLTQNNSRCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYK |
6 | 2bw3A | 0.18 | 0.17 | 5.40 | 7.50 | HHsearch | | ---------------------------SHQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFID-IKFFIKVKAEYGEHNVEELLPSPITLSR-KVTSDAKEKKALIGREIKSAVKDGASATIDLWTDNKRNFLGVTLHYHENNELRDLILGLKSLDERSTAENIYKKLKAIFSQFNVEDSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEET-------PELN-PILACKNIVKYFKKANLQHRLRSKSECPTRWNSTYT-LRSILDNWESVIQILSEAGETQRIVHINKSIIQT-VNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWELSIWHYTAFFFYPPALHQ---QEKVAQIKEFCLSKEDLELINRSSFNELSATQDISTTPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYK |
7 | 2bw3A | 0.17 | 0.16 | 5.21 | 3.98 | FFAS-3D | | ---------------------------SHQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDIKFFIKVKAEYGEHVNVEELLPSPITLSRK-VTSDAKEKKALIGREIKSKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFRSTAENIYKKLKAIFSQFNVEDLSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETP-ELNPILACKNIVKYFKK-----ANLQHRLRSSLKSECPTRWNSTYTLRSILDN-WESVIQILSEAGETQRIVHIN-KSIIQTVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWELSIWHYTAFFFYPPALHQQEKVAQIKEFCLSKEDLELINRSSFNELSATQLNQDISTTPQLTQNNSREPPVCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFY- |
8 | 2bw3A | 0.15 | 0.13 | 4.52 | 2.13 | EigenThreader | | ---------------------------SHQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDIKFFIKVKAEYGEHVNVEELLPSTLSRKVTSDAKEKKALIGREIKSAVEKDGASATIDLWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLFERSTAENIYKKLKAIFSQFNVEDLSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEETP--ELNPILACKNIVKYFKKA----NLQHRLRSSLKSECPTRWNDN-----------WESVIQILSEAGETQRIVHINKSIIQTVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIENLSIWHYTAFFFYPPALHQQEKVAQIKEFCLSKEDLELINR-------SSFNELSATQLNQDISTTSFFFPQLTQNNSREYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYK |
9 | 2bw3A | 0.18 | 0.17 | 5.52 | 2.36 | CNFpred | | --------------------------SHMQSRELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVKAEYEHVNVEELLPSPITL-SRKVTSDAKEKKALIGREIKSAVKDGASATIDLWTDNKRNFLGVTLHYHENNELRDLILGLKSLDFRSTAENIYKKLKAIFSQFNVEDSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEE-------TPELNMPILACKNIVKYFKKANHRLRSSLKSECPTRWNSTYTMLRSILDNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWELSIWHYTAFFFYPPALHMQQ--EKVAQIKEFCLSKMEDLELINRMSSFNELSATQ-FFPQLTQNNSREPPVCPSDEFEFYRKEIVILSDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYK |
10 | 2bw3A2 | 0.19 | 0.12 | 4.03 | 1.00 | DEthreader | | -------------------------------------------------------P-SA-VSGSGFIDIKFFIKVKAE--YGEHVNVEELLPSPITLS-RKVTSDAKEKKALIGREIKSAVKDGASATIDLWTDIKRNFLGVTLHYHENNELRDLILGLKSLDFRSTAENIYKKLKAIFSQFNVEDLSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEE-------TPELN-----------------------------------------------------------------------------------------CSSPSLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIWEELSIWHYTAFFFYPPALH-QQ--EKVAQIKEFCL-SKEDLELIN-RSSFNE-----------------EPPVCPSDEFEFYRKEIVILSEDFKVEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGNIITEKRNRIGQQTVDSLLFLNSFYK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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