Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCSSSSSSCCC MLEKRLLRMGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALWHTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHTHTLTHTHTHRDTHTASYRRGIETHTTRQPLRLRGSAHDENDPRVREQPRGTQADLSSRSRMAARLLGRLTPTNTVRAGLRLGSRAASPDPAWGFLIVVGPL |
1 | 6pifG | 0.08 | 0.08 | 3.13 | 0.52 | CEthreader | | NMGVTAMTCGGAFRMLKSGAKFSSPPHLVLPNIRVCGATALSSPVTVGIPSLTAFFGFVHAFERNITSSFRVESFAICVHQLHVEKRGLTAEFVEKGDGTISAPATRDDWQCDVVFSLILNTNFAQHIDQDTARGSAKIAIDDFKHINSFSTLETAIESLSLYAQSNNNLSDLLAAMTEDHQLMASCVGYHLLEEPKDNSLRGYKHAIAECIIGL |
2 | 6gmhQ | 0.06 | 0.06 | 2.60 | 0.55 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYDQAFQYYYQAT |
3 | 5o9zE | 0.15 | 0.13 | 4.36 | 0.65 | FFAS-3D | | --EQKKLRRQTRREAQKELKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHRAQMAKRQKA-----------------HEEANAARKLTAEQRKVKKIKKLKEDISQGVHISVYRVRNLSNPAKKFK--IEANA--GQLYLTGVVVLHKDVNV----VVVEGGPKAQKKFKRLMLHRIKAVKKTNKCVLVGTAKDRSFGEMKF------- |
4 | 3jc8Oa | 0.05 | 0.04 | 1.98 | 0.95 | SPARKS-K | | KYLDQFVKAPPAIKFGGLAFVVLTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLNERRREMDVLEQKLSEALTE-LPEQRDIEELLAQINDIGKKSG------LELSSVTPGKESVGGGEFF------ARIPIKMTVSGNY--------------------HEIALFLQEMANMRRIVNVNKFDSAKLKNEKVVLQSEFQATTFRF |
5 | 5xteL | 0.11 | 0.03 | 1.00 | 0.55 | CNFpred | | ---------PKAVELLGDIV--------QNCSLEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQG------------------------------------------------------------------------------------------------------------------------------------------------ |
6 | 5uj9A | 0.02 | 0.01 | 1.09 | 0.67 | DEthreader | | --------VLKLYAWELAFKDLRQELKVLKSYAVFGSMAVSIGGIFASRRLHLDLLHNVLRS-PISFFERTPSGLVRFSLDTSMIPQVIKMFMGSLFNVIAGYFFQVSSEMTNVA------------------------E-------QDMAP-PKDWQVGRVEFRIIIINIAKIGLHDLR------------KITIILVVLRVIVL--------- |
7 | 1wb1C | 0.06 | 0.06 | 2.50 | 0.89 | MapAlign | | --GPKTQTGEHMLILDHFNIPIIVVITKSDNAGTEEIKRTEMIMKSIGFGVDELKNLIITTLHAFPIKGAGTVVTGTINKGIVKVGDELKVLPINMSTKVRSIQYFKESVMEAKAGDRVGMQTVDKIVAKIKISDIFKYNLTPKMKVHLNVGMLIVPAVAVPFKNIILNEVISGNEYAFELEEKVLAEVGDRVLITRLDLPPTTLRIGHGLIEEF |
8 | 5nnvA | 0.09 | 0.09 | 3.50 | 0.58 | MUSTER | | AESSAISAKEAKIEDTRDK-IQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSE-SSSTSGEEKLEEAAKHKLNDKTKTIELIALRQRIKLQHGLDTYERELKEKRLY |
9 | 2pffB | 0.15 | 0.15 | 5.00 | 0.46 | HHsearch | | SLEHVLLVPTIASQLQEQFNKILPTEWLENPSNTPDKQGLVTAVAIAETDESFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILSLENNEGVPSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNPPQSLYLTSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPA--SDLINKDVKNNVSFNAKGSDLRVLSIIRLPV-KWEFILDFGPL |
10 | 1vt4I3 | 0.08 | 0.08 | 3.25 | 0.49 | CEthreader | | PERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|