Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCCCCCCCCHHHHCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC RELEFTVAQLEGQFHQENAKDTQGQTDVMVNTDPVHGLLTRESCDKGIEVNLLGSMESESWGHRGEENGLLWGPDGHKQGNQSPAERVLLPQLSLPQGPEQVLTSSVHSFLSTELRIEEAGTEQEGGPQGGTRGAGGFLWGSDRKTPPAGSSSPPVEISPSTSLKSIMKKKDYGFRAGGNGTKKNLQFVGVNGGYETTSSEETSGEDSTPEDLSDSEAEKKCDGPDHKHVKDAHLTCEAGQGIPEGTCHAAQESGPGEEVPHSKAERYKPSEEFLNACRALSQHLPETGTTTDQLLRQSLNTI |
1 | 5yfpB | 0.09 | 0.09 | 3.29 | 1.21 | SPARKS-K | | KRIWTQIENLLVTYKDLIWNSLINS--------NFNIDQPQETILSLFSKLLNLENFIKNTTSSSNENPQNELNELSGHMISKIIHSQRLILQNNTNQDKSQGCVELSYYLKINQLFQIISDTGKDSEGLKSTVEPNKVNTISGTSYLNLNCQSSQGLTDSPTIIEMWLLILKYINDLWKICDQFIEFWEHDGTYQNSIINEKRKENILIGDSNIIESYQKSLILKEEQINEVRQNLISFFTSSQSSLPSSLKDSTGDISGSPLDYGFIPPPKIVEPILKFSTELAQLNITTITICRNTLSTI |
2 | 1vt4I3 | 0.12 | 0.12 | 4.20 | 1.61 | MapAlign | | --TLQQLKFYKPYIGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 5ybeA3 | 0.30 | 0.05 | 1.40 | 2.15 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPEKEEIRERYELSEKMLSACNLLKYNIKDPKALASKDMRICLNTL |
4 | 3hxlA | 0.04 | 0.04 | 2.16 | 0.87 | CEthreader | | YSIDAQLRLINEALKRAKTLLLYRLNAGTKAAVTVGNLTVTAKWGGARGNDITLVIQENIDDETKFDVSTLVDGAELDKQTVSDIAGLAANDWVIFSGTGALTETAGAPLINGSDGAVTNQAYIDYLAAVEIFDFNTIALPSTDDALKATFTAFAKRLRDDEGKKIQVVLENYPAADYEGVISVKNGVVLADGTILTAAQARVNESLTYQGYDEAVDVAPRYTNAQIIAALQAGEFLFTASDNQALVEQDINTLTSFTADKGKQFAKNRVIRVLDGINNDFVRIFSKFYSNNADGRNLLKSEC |
5 | 5o9zG | 0.06 | 0.06 | 2.51 | 0.65 | EigenThreader | | INREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRDADSCVAHNALECARAIFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTAVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMEAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKLKKCEHDPHVLLAVAKLFWSQFHRTVKIDSDLGDAWAFFYKFELQ |
6 | 5ybeA3 | 0.31 | 0.04 | 1.30 | 0.37 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEIRERYELSEKMLSACNLLKYNIKDPKALASKDMRICLNTL |
7 | 5yfpH | 0.07 | 0.06 | 2.54 | 1.15 | SPARKS-K | | NVAMLELKRVRANINDLNEVLD----------QCTKIAEKRLQLQD----------QIDQERMRRDRSSVLILEKFWDTELDQLFKNVEGAQKFINSTKGRHITTGKPLQMVQIFILNDLVLIADKSRDKQNDFIVSQCYPLKDVT--------VTQEEFSTKRLLF--------KFSNSNSS----------LYECRDADECSRLLDVIRKAKDDLCDIFHVEEENSKRIRESFRYLQ-STQQTPGRENNRSPNKNKRRSMSITPDMSSTESAVETLLDIESQLEDLSLMLLNLISLKIEQR |
8 | 4nuyA | 0.15 | 0.03 | 1.11 | 0.27 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELQILGYP----LPNADTIMKTVTTAKELSQQKDKFSQK-----------------------------------------------LDELKIKEMALETSLNSK-IFDVTAINANAGVL |
9 | 6rw9A | 0.04 | 0.03 | 1.52 | 0.67 | DEthreader | | ----------M--TGK--TD--NKYYETLSRRSG-----VTPYNAPFSPKLILNFVKIDLMTLDAPADDIALAERLPTPDVYN-----LV-IPAINTGKITFPGWLLRLNK-----NVRPFDLLAGQQTQNAEITTTARYSTGVFDLRTGQTGVALVVSGYH--FIPYGDMVRPVIFHSRLYCAIAWYQIEKETQLTLNTLLN------G-----------------------SSDDIS---TPLAFPFGKLSITIPINKKTDPVQKVIS---LY-TT--G----------LNTLT-EP-PGQ |
10 | 2pffB | 0.12 | 0.12 | 4.29 | 1.55 | MapAlign | | ---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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