Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC MEKTDAKDQSSQGDEEKDPPKSHPYSVETPYGFHLDLDFLKYVDDIEKGNTIKRIPIHRRAKQAKFSTLPRNFSLPDSGARPPAAPPLQNWSPVVPREASLGTQEQNQSPPLGNAPQASTEPEDAELTFGSGRPQLLRASSMPATLLHSRASEEPGLSLGPPAPPALPPLQGEGSVCDGTFEPAEGLAGFHSSSPRASTRIPELVQEGAEPPEGVVKVPNHLPLPGMRSIGIRVTEESLGLARVDPGSISSLKQQVSALEGELSGRTEELAQVRTALQQQEEEIKAREQRIREETSSNLPGKEHPGRPPSSPTDATIGQYVKKIQELLQEQWNCLEHGYPELASAIKQPASKLSSIQSQLLSSLNLLLSAYSAQAHPPKEPPAS |
1 | 1vt4I3 | 0.07 | 0.07 | 2.89 | 1.05 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 1vt4I3 | 0.07 | 0.07 | 2.86 | 1.47 | MapAlign | | -------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 6f1tX2 | 0.16 | 0.04 | 1.30 | 1.05 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QH--------IIRLESLQAEIKMLSDRKRELEHRLSATLEE--NDL-----L------QGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGGGG----------------------------------------------------------------------------------- |
4 | 5yfpC | 0.06 | 0.06 | 2.69 | 0.70 | CEthreader | | ERLLVAELAEDALETGCPHLLEIHFLLTSARDFQEQVVVMAKEATEDAQRTVKLFSRLSGIISKFDKLLDGLTYDIVEMARAEQISLAIRLFKIYDLEEREDLRIEAIRNIIKKKEIEIEKSSIKKLPNSKNTARLQDETPKVIEYPTNKGLYQEIMSGTISTRTAPRGYKHFLIGEMREKYVGDQKFDVLDNMDWIFNELIIVKEHIAIFEVYFDQYYKELHSLITDLVESEPETIIILDILAFDKTFQDTLKQDKSVIGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQVEVAAGTNQAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINYNHKYDIDPESITPE |
5 | 6wm2R | 0.05 | 0.05 | 2.25 | 0.73 | EigenThreader | | VAGVINRERPLEDPVTGDYVHRASLYPCPETPQAAAKNIRVWFIKVRKMKAIYHTLNLCVTQKDLDSIQFALRRGTEHSGSTVPSITNQTPPTYNKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITFPFLFAVMFGDFGHGILMTLFAVWMVLRRYIILLMGVFSMYTGLIYNDCFSKSLNIFGSSWSVRPMFTYNWTEETLRGNPVLQL------NPALPGVFGGPYPFGIDPIWNIPLNIYFGFIPEIIFMTSLFGYLVILIFYKWTAYLLCVPWMLLFKPLVLRRQYLRRKFDFGDTMVHQAIHTIEYCLGCISNTASYSLAHAQLSEVLWTMVIFFFFTAFATLTVAILEGLSAFLHALRLHWVEFQNKFYSGTGFKF |
6 | 5mqfT | 0.09 | 0.09 | 3.33 | 0.80 | FFAS-3D | | --KNSLAYQRMSWEANGLINKVNISNISI------IIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTVAIGFLKECGQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGFKEQYDTIHRETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRI-FVKIFFQELCEYM--GLPKLNARLKDETLQPFFEPRNTRFAINFFTSI-------------- |
7 | 6e5oY | 0.13 | 0.12 | 4.14 | 0.86 | SPARKS-K | | IRKKLSADNATKPVSRSGPMKTLLVRVMT--------------DDLEK----------RRKKPEVMPQVISNNAANQVYWQEFKDDHVGLMCKFAQPASKKIDQNKLK-----PEMDEKGYTNYFGRCNVAEHEKLILLAQLK---PVKDSDEAVTYSLGKFGQRASIHVTKESTAQIAGNRYASGPVGSDACMGTIASFLSKYQDIIIEHQKVVKGNQKRLESLRENLEYPSVT---LPPQPHTKEGVDAYNEVIARVRMWVNLNLNTINEVKKLIDAKRDMGRVFRNTILEGYNYLPNEDHKKRENPKKPAKRQFGDLLLYLEKKFDEAWERIDKKIAGLTSHIEREEAEDAQSKAVLTDWLRAKASFVLERLKEMDEKEFY |
8 | 2tmaA | 0.14 | 0.07 | 2.21 | 0.54 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQKKLKGTEDELDKYSEALKDAQ------EKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKY |
9 | 6l7eA | 0.05 | 0.03 | 1.39 | 0.67 | DEthreader | | YELIGYNNQFSG--------RA--YV-APGTVSPAY--E--------------------LSQNMDIELSTLSLSN---------------------S-------KTESKLENYTKVEMLSTFRP-----------D-------V-----------YAQWEARSALYYIRQVA-KAAAAIYLYE-N-N--DYVYTSSGPVEINTAI--------QPS-EMNYQFNALIIIPVTLKVD-L-WYTHIIYSGSPEDTSHDPMHYKVSTFMLLLMYWQTLAQRVYNLRHNLSGQPLYL-PI--Y--ATPADPKA-LL---A--A-----------------MVSQLTQFGS--T-LQNIIERQDAEALNALLQNQ-----------QQL |
10 | 5anbK | 0.06 | 0.06 | 2.60 | 1.34 | MapAlign | | ADCLISSNGIISSRLAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTLFTSKVLEERAERETESQVNPNSEQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIGIKKEVLMKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIWSLYDAVLKKDKDKIDKIRQRHEKLAAAQGSEMPQLVKGMKLLNQATAGEVHLQRCLDDSVWTGPADKASKEASRYRDLGNSIVSGFQLATLLAKEGQEEETCSGGNENLTDCYGPFSGQLIATMKEACRYALQVKPQRLMAAMY----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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