Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHSSSCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCSSSCCCCCCCCCCCCCCCCSSCHHHHHHHCC MQTSEREGSGPELSPSVMPEAPLESPPFPTKSPAFDLFNLVLSYKRLEIYLEPLKDAGDGVRYLLRWQMPLCSLLTCLGLNVLFLTLNEGAWYSVGALMISVPALLGYLQEVCRARLPDSELMRRKYHSVRQEDLQRGRLSRPEAVAEVKSFLIQLEAFLSRLCCTCEAAYRVLHWENPVVSSQFYGALLGTVCMLYLLPLCWVLTLLNSTLFLGNVEFFRVVSEYRASLQQRMNPKQEEHAFESPPPPDVGGKDGLMDSTPALTPTEDLTPGSVEEAEEAEPDEEFKDAIEETHLVVLEDDEGAPCPAEDELALQDNGFLSKNEVLRSKVSRLTERLRKRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSK |
1 | 1vt4I | 0.06 | 0.06 | 2.44 | 1.50 | MapAlign | | -------------------------------MDFETGEHQYQYKDILSVFEVDNFDCKEEIDHIIMSKDAVSGTLRLFWTEEVLRINYKFLMSPIKMTRMYIEQRDRLYNDAKYNVSRLQPYLKLRQALVALDVCLSNCNSPETVLEMLQKLIHSIQAELRRLLKAKAWNAFNLTTRFKQVTDFLLSIIAESIRDHVNCDKLTTIIESSLNVLEPAEYRVMVVVNKLHLKVKLSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 1x4uA | 0.91 | 0.17 | 4.85 | 1.69 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSK |
3 | 1vt4I | 0.06 | 0.06 | 2.51 | 0.97 | CEthreader | | IIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 6gmhQ | 0.08 | 0.08 | 3.13 | 0.93 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGESCYQLARSFHVQEDYDQAFQYYYQATQFA----SSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAY---PNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTLSAYGTATRILQEKVQADVPPEILNNVGALHFRLG--NLGEAKKYFLASLDRA-KAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDK----GN |
5 | 3zyqA | 0.16 | 0.08 | 2.50 | 0.88 | FFAS-3D | | -------------------------------------------------------------------------------------------------------TFERLLDKATSQLLLETDW----------------------------ESILQICDLIRQAKYAVNSIKKKVNDKNPHVALY-------------------ALEVMESVVKNCGQTVHDEVAN-KQTMEE------------------------------------------LKDLLKRQVEVNVRNKILY--------------------LIQAWAHAFRNEPKYKVVQDTYQIMKVEPDWVDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIE------KEVRVCEPCYEQLNR |
6 | 7abhu | 0.09 | 0.09 | 3.43 | 0.79 | SPARKS-K | | ARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAAGLAAFLKAIGYLIMKKIVLKVVKQCCGTDVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVG-AAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLDIDHKLEEQLIDGILYAFQEQVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKSRTAVVMKTCQEEKLMGHLGVVLYEYEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPTPILKNRHEKVQENCIDLVGRIADRGAEYVREWMRICFELLELLKAHKKRRATVNTFGYIAKAINNLKVQERQNRVCTTVAIAIVAETCFTVLPA |
7 | 4zivA | 0.12 | 0.07 | 2.57 | 0.81 | CNFpred | | ---------------------------------PYDTTPFVISIHEVVKTLEAIILVFLVMYLFLQTLIPTIAVPVVLLGTFAVLAAFSINTLTMFGMVLAIGLLVDDAIVVVE---------------NVERVMAEEGLPPKEAT---RKSMGQIQGALVGIAMVLSAVFVPMA-FFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCAT-NRMFEKSTHHYTDSVGGILRSTGRYLVLY-----------------------------------------LIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTK---------------------------------------------------------------------- |
8 | 6r9tA | 0.04 | 0.03 | 1.49 | 0.67 | DEthreader | | --SHPVSKAFAFQCQIQFGPCGQMARYKLASLKTGTCVEWNNIDFGDYQDGY-------------A-GTAASTPKASAGPQPLLQVPSQAGQQ-GL-VEPTQFARANQAIM--AQVLSAATIVAKHTSALCNCAQFVQSNLSAFASNPEFSS-IPA-QISPEGRAAMEPIVI----------------GQLECETAIASMAYFLASAMMTEAVEDLTTLNEAASAAGVVGGMVD------------------------------IT-AI--LD-RTAKAIAVTVQEMVTKS------------------------K--IEARRVSEKVS--T--AGDATRADVKLALIAVKDVAKAL--------TNVTSLLKTKARALEATTERNLELLDHVLLTLQ------------- |
9 | 1vt4I3 | 0.05 | 0.04 | 2.00 | 1.42 | MapAlign | | -------------------------------------------------LHRSIVDHYNIPKTFDSDDLIPPYQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIENLICSKYTDLLRIALMAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
10 | 1st6A | 0.09 | 0.08 | 3.21 | 0.65 | MUSTER | | IRVCKG------LEYLTVAEVVETMEDLVTYTKNLGMTKMAKMIDERQQELQEHRVMLVNSMNTVKELLPISAMKIFVTTKNTKSQGIEEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMKRALAL----IDSKMNQAKGWLRAGEQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQTSLQNLQSKTNRAVANTRPVKAAVHLEGIEQAQRWIDNPTVDDRGVGQAAIRGLVAEG-RRLANVMMGPYRQDLLAKCDRVDQLAAQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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