>Q5T1V6 (210 residues) KNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITG LKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEY VHQIGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSILPPQLLNSPYLHDQKRKEQ QKDKQTQNDLVTGANLMDIIRKHDKSNSQK |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | KNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSILPPQLLNSPYLHDQKRKEQQKDKQTQNDLVTGANLMDIIRKHDKSNSQK |
Prediction | CCCCCCCSSSSSSSSCCHHHHHHHHHHHHHCCCCCCCSSSSSCCHHHHHHHHHHHHHHCCCCSSSSCCCCCHHHHHHHHHHHHCCCCCSSSSHHHHHCCCCCCCCCSSSSCCCCCCHHHCHCCCCCCCCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC |
Confidence | 998889658999995817899999999983377789789995770507999999997259617886299999999999999863999789863355447887899869861699981552102663324899616999747207899999999999919999988996423320244333456665578878876430345542454239 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | KNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSILPPQLLNSPYLHDQKRKEQQKDKQTQNDLVTGANLMDIIRKHDKSNSQK |
Prediction | 854517504020220547503620251056474752100000422540240053037355040100027251730450064047351300000020032121770420000121644440100011002034412010000472361043015005627360253047245446554566756446576455465445444555456678 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCSSSSSSSSCCHHHHHHHHHHHHHCCCCCCCSSSSSCCHHHHHHHHHHHHHHCCCCSSSSCCCCCHHHHHHHHHHHHCCCCCSSSSHHHHHCCCCCCCCCSSSSCCCCCCHHHCHCCCCCCCCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC KNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLFWDIAKRVKPTGSILPPQLLNSPYLHDQKRKEQQKDKQTQNDLVTGANLMDIIRKHDKSNSQK | |||||||||||||||||||
1 | 4d25A | 0.34 | 0.27 | 7.98 | 1.17 | DEthreader | VGGASTDVEQIFIEVTKYEKRNSLKQLIEEN--DGKRILVFVETKRNADFIAAMLSEQ-QLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYDSDDLALVADLSKILRQADQSV-P--DF---L---K---------------------------------- | |||||||||||||
2 | 5ivlB2 | 0.28 | 0.27 | 8.17 | 1.68 | SPARKS-K | ----VPNIQQYYLEVHEKKKFDILTRLLDIQAPE--LAIVFGRTKRRVDELAEALNLR-GYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERMKDEALEGQQRIAIEKLLNVVETRAAEELLEEHDSVTIVAACLKMLEHH | |||||||||||||
3 | 7aucA | 0.14 | 0.14 | 4.68 | 0.50 | MapAlign | -SFNRHNLKYYVLPKKPKKVAFDCLEWIRKH-HPYDSGIIYCLSRRECDTMADTLQR-DGLAALAYHAGLSDSARDEVQQKWINQGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKSMRAYCKKHDVSCD--NCCKKVSQREEMVKKCLGELTEVCKTEDKLEKYGAEVISV----- | |||||||||||||
4 | 4d25A2 | 0.34 | 0.26 | 7.85 | 0.38 | CEthreader | VGGASTDVEQIFIEVTKYEKRNSLKQLIEE--NDGKRILVFVETKRNADFIAAMLSEQQ-LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYDDQDLALVADLSKILRQADQSVPDFLK------------------------------------------- | |||||||||||||
5 | 2i4iA2 | 0.36 | 0.29 | 8.51 | 1.67 | MUSTER | ---TSENITQKVVWVEESDKRSFLLDLLNATG-KDSLTLVFVETKKGADSLEDFLYHE-GYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR--NLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHY----------------------------------- | |||||||||||||
6 | 3i32A | 0.18 | 0.17 | 5.56 | 1.13 | HHsearch | -----VTYEEEAVPAPVRGRLEVLSDLLYVAS--PDRAMVFTRTKAETEEIAQGLLR-LGHPAQALHGDMSQGERERVMGAFRQGEVRVLVATDVAARGLDIPQVDLVVHYRMPDRAEAYQHRSGRTG-----GRVVLLYGPRERRDVEALERAVGRRFKRVPTPEEVLEAKW--RHLLARLARVYRLYQDFAGRLFAALLALLLGGAPA | |||||||||||||
7 | 4d25A2 | 0.34 | 0.26 | 7.84 | 2.41 | FFAS-3D | -GGASTDVEQIFIEVTKYEKRNSLKQLIEEND--GKRILVFVETKRNADFIAAMLSE-QQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYDSQDLALVADLSKILRQADQSVPDFL-------------------------------------------- | |||||||||||||
8 | 5ivlB2 | 0.26 | 0.24 | 7.49 | 0.70 | EigenThreader | ----VPNIQQYYLEVHEKKKFDILTRLLDIQA--PELAIVFGRTKRRVDELAEALNLRG-YAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTK-----RKMERMKPIAIEKLLNVVETERAAEELLEEHDSVTIVAACLKMLEHH-- | |||||||||||||
9 | 4pxaA | 0.35 | 0.28 | 8.38 | 1.65 | CNFpred | VGSTSENITQKVVWVEESDKRSFLLDLLNATG-KDSLTLVFVETKKGADSLEDFLYHE-GYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENM----------------------------------------- | |||||||||||||
10 | 4d25A2 | 0.34 | 0.27 | 7.98 | 1.17 | DEthreader | VGGASTDVEQIFIEVTKYEKRNSLKQLIEEN--DGKRILVFVETKRNADFIAAMLSEQ-QLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYDSDDLALVADLSKILRQADQSV-P--DF---L---K---------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |