>Q5T1V6 (262 residues) LSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEH CSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALF ESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVII ATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATI PTSIEQLASQLLHNPVRIITGE |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | LSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGE |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCSSSCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCSSSSCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHCCCCSSSSCCCHHHHHHHHCCCCCCCSSSSSSSCHHHHHHCCCHHHHHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHHHCCCSSSSSCC |
Confidence | 9998756444347863335876897787499999999999819489548899886978880999999999999199999989999987997299779982588749999999999997516999489998597899999999999998507997299998996889999999539929996973799999819933574249997334544402968999999984995441799852699999999999833987999489 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | LSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGE |
Prediction | 8552744636444224563014336404713562055017727040417511510330671603640151047361651210011002100432100000413121120020100110265772000000000110030026104500541450200000021435401530452010000020000000444414054030000000120362322610440075037610000000111740350055206422404138 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCSSSCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCSSSSCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHCCCCSSSSCCCHHHHHHHHCCCCCCCSSSSSSSCHHHHHHCCCHHHHHHHHHHCCCCCSSSSSSCCCCHHHHHHHHHHHCCCSSSSSCC LSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGE | |||||||||||||||||||
1 | 6uv0A1 | 0.37 | 0.35 | 10.42 | 1.50 | DEthreader | -------------KF-EKNFYVEHPEVARLTPYEVDELRRKKEITVRGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLPICLVLAPTRELAQQVQQVADDYGK-CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
2 | 6uv0A1 | 0.37 | 0.36 | 10.77 | 2.21 | SPARKS-K | ----KKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLPICLVLAPTRELAQQVQQVADDYGKC-SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
3 | 6uv0A1 | 0.38 | 0.35 | 10.30 | 0.87 | MapAlign | ------------------NFYVEHPEVARLTPYEVDELRRKKEITVRDV-CPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLPICLVLAPTRELAQQVQQVADDYGKCS-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
4 | 6uv0A1 | 0.37 | 0.36 | 10.77 | 0.49 | CEthreader | ----KKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQGDGPICLVLAPTRELAQQVQQVADDYGKCS-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
5 | 6uv0A1 | 0.37 | 0.36 | 10.77 | 2.05 | MUSTER | ----KKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQGDGPICLVLAPTRELAQQVQQVADDYGKCS-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
6 | 6uv0A | 0.37 | 0.36 | 10.77 | 1.29 | HHsearch | ----KKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQGDGPICLVLAPTRELAQQVQQVADDYGKCS-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
7 | 6uv0A1 | 0.37 | 0.36 | 10.65 | 3.09 | FFAS-3D | --------DLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYGPICLVLAPTRELAQQVQQVADDYGKCS-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
8 | 6uv0A | 0.36 | 0.35 | 10.46 | 0.88 | EigenThreader | ----KKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKK-EITVRDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLPICLVLAPTRELAQQVQQVADDYGKCS-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
9 | 6uv1A | 0.38 | 0.35 | 10.41 | 2.05 | CNFpred | ----------------EKNFYVEHPEVARLTPYEVDELRRKKEITVRGGVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ-DGPICLVLAPTRELAQQVQQVADDYGKCS-RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
10 | 6uv0A | 0.37 | 0.35 | 10.42 | 1.50 | DEthreader | -------------KF-EKNFYVEHPEVARLTPYEVDELRRKKEITVRGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLPICLVLAPTRELAQQVQQVADDYGK-CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |