Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPAL |
1 | 5hlrA | 0.05 | 0.05 | 2.23 | 0.56 | CEthreader | | RRYEAEHAHLTRIIHDEIAANPFAGIVCEPDNYFVQCNSVAYLSLWVYDRLHGTDYRAATRAWLDFIQKDLIDPERGAFYLSYHPVKPWISAYTTAWTLAMVHGMDPAFSERYYPRFKQTFVEVYDEGRKARVRETAGTDDADGGVGLASAFTLLLAREMGDQQLFDQLLNHLEPP |
2 | 5nx6A | 0.11 | 0.11 | 3.91 | 0.47 | EigenThreader | | TGDAAEATYRRWSVGARWFYLAQGEDLDLGCDIFGWFFAYQTAAFVNRTVAMEHPLNIAFHDLWQRESALWQRRAVDHWTQYLTAHITEATNPTVYTTPEVQTLLHTTNQNINIVNDVLSLEKEEAHGDPHNLVLVIQHERQSTRQQALATARRMIDEWTDTFIRTEPRLPALCGR |
3 | 6em3n | 0.14 | 0.13 | 4.44 | 0.46 | FFAS-3D | | ---KERAIRDIDDALNMLFLFSNLPSTNQVSSKIINDAQKICNQWLAYVAKEVDFRIMLTFLEFYSTLLHFVLYKLYTDSGLIYPPKLDLKKDKII----------SGLSSYILESRYDSPVASLFSAFVFYVSREVPIDILEFLILSCGGNVISEAA---MDSKVTHQIVDRPVL |
4 | 6ahfC1 | 0.09 | 0.07 | 2.81 | 1.04 | SPARKS-K | | -------------------QFTERA----------LTILTLAQKLASDHQHQLQPLAAFDGSVPYLQNLIEKGRYDYDLFKKVVNRNLVRIPQQQPAPAEITPYALGKVLQDAAKIQKQQKDSFIAQDHIL-FALFNDSSIQQIFKEAQVDIEAIKQQALELRG--NTRIDSRGAD |
5 | 6f34A | 0.13 | 0.05 | 1.76 | 0.73 | CNFpred | | -----LSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQG-------------------------------------------------------------------------------------------------------- |
6 | 6jxaA | 0.04 | 0.03 | 1.70 | 0.83 | DEthreader | | PQDVGFAALSSLRLGSIIQLANYVQLAWSESVYTLGSFLDEQAQKLR-SN--GEI-EDREHRSYTGK--T-------KALLIRHYNRLLNRSEVKALLQEWINQLYEIIFPWQQVFQVNGIGVAGEIGFDFRSCRYAVLR-KDYVKVMCVL------------------------- |
7 | 6tgbA | 0.06 | 0.06 | 2.65 | 0.84 | MapAlign | | EIPLAQEVTTTLWEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--- |
8 | 4k0mC | 0.20 | 0.19 | 6.19 | 0.80 | MUSTER | | RTAKDETV----EVHAKLGI-DPSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
9 | 6wcuA | 0.40 | 0.06 | 1.68 | 0.50 | HHsearch | | ETMKDEELRRMQEMLQRMKQ-----------------QMQDQ-------------------------------------------------------------------------------------------------------------------------------------- |
10 | 1r4wA | 0.08 | 0.08 | 3.09 | 0.46 | CEthreader | | AMVPHKGQYILKEIPLLKQLFQVPMSVPKDFFGEHVKKGTVNAMRFLTAVSMEQPEMLEKVSRELWMRIWSRDEDITESQNILSAAEKAGMATAQAQHLLNKISTELVKSKLRETTGAACKYGAFG----LPTTVAHVDGKTYMLFGSDRMELLAYLLGEKWMGPVPPTL------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|