Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCCCCCCCHHHCCCCCCCCCCCCCSHHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCC MGLRAGSRCRADHLAQPQPQGHLAPVLRCGECWRARGLPGGCCLHTEGGCSLGAQAGWRTAGWEARGRRDLGLETTSAHSRSLLHLSSWRRPDVGEAAGAELLQRAPLQQPDPAQAAVEGGLLARLPRPQDQGCGQHRPHSPRLVDIALPGGGWT |
1 | 2ce8A | 0.07 | 0.07 | 2.92 | 0.49 | CEthreader | | GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW |
2 | 5wlcSG | 0.06 | 0.05 | 2.30 | 0.53 | EigenThreader | | FQPVRLFAY-TVSKDLNTTEGHYDEILTVAASP---DGKYVVTGGRDRKLIVWSTSIDVVSMVD--DFHFITGSDN-----GNICLWSLAKKKPIFTERIRKRQLQPFWITSNVFISGSWSGSLELSGAKGRWIANVSGARNGIYSAVIDQ---- |
3 | 2gycA | 0.25 | 0.20 | 6.19 | 0.30 | FFAS-3D | | KGLKAGDQIQSGVDAAIKP-GNTLPM---------RNIPVGSTVH-----NVEMKPG--KGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLAGAARWRG------VRPTVRGTAMNPVDHPH-------GGG-- |
4 | 6ahfC1 | 0.14 | 0.13 | 4.37 | 0.86 | SPARKS-K | | LTILTLAQKLASDHQHPQPIHILAAFIETPEDGSVPYLQN---LIEKGRYDYDLKVVNRNLVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDFIAQDHILFALFNDSSIQQIQVDIEAIKQQTRIDSRGADTNTPLE-------------- |
5 | 3lnoA | 0.17 | 0.05 | 1.70 | 0.45 | CNFpred | | -------------------------------------------------------------------------------------------AMSQEAFENKLYANLAVIDPELGVDIVNLGLVYDVTADE-----------NNNAVITMT----- |
6 | 6fhjA | 0.09 | 0.06 | 2.46 | 0.83 | DEthreader | | NEYKDEMTAFYRLLRTTSFDAGWDQVQIISYLRHASSNPDLVDEA----GSQYLVK--------------------GAIGGKGSAAARATAGKVAKV--L---L------EFQAAAIIFYAELTDYKQATRININYVSSTNYSSTFY-------- |
7 | 5h64B | 0.08 | 0.08 | 3.03 | 0.82 | MapAlign | | ---------KMRRASSYSSLNSLIGVSFNVYTQIWRVPPASSTLTNDVTRVTAMEYLNLLLTATDDGAIRVWKNFADLEKNAWQGLSDMLRIWDTDREMKVQDIPTGADSCVTSLSCDSHRSLIVAIRVYDRWVVKASLQKRPDIFDPRMPESVN |
8 | 5ghfA2 | 0.15 | 0.14 | 4.57 | 0.41 | MUSTER | | -QPNSLEARDIRYHLHSDAVRLEAEGPLVIE--RGDG----IYVEDVSGRYIEAMSGLWSVGV-GFSEPRL-AEAAARQMKKLPFYHSGHPVAAAVAENLAIIEERDLVA---NARDRGTYMQKRLRELQDHPLGEVRGVGL-IAGVELVTDKQA |
9 | 6o38A3 | 0.16 | 0.03 | 1.08 | 0.49 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------LATV-SPTTGSNYELIPLTTATQKVLIQDDKWA |
10 | 3dlmA | 0.06 | 0.06 | 2.57 | 0.49 | CEthreader | | NLYFQGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKSLLGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPNRPMV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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