>Q5SVQ8 (170 residues) MKKRRKVTSNLEKIHLGYHKDSSEGNVAVECDQVTYTHSAGRPTPEALHCYQELPPSPDQ RKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKN PSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDA |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MKKRRKVTSNLEKIHLGYHKDSSEGNVAVECDQVTYTHSAGRPTPEALHCYQELPPSPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDA |
Prediction | CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCHHHHHHHHHHHHHHHCCCSSSSSSSSCCSSSSSHHHHHHHCCHHHHHHHHCCCCCCSSSSCCCCHHHHHHHHHHHSSSSSSSCHHHHHHHHHHHHHHCCCCC |
Confidence | 98643463145667764236777887655666666567789888876666555789988646770660799999999999986496253899999999972444577727999999816888997981888999999999964222699568789999999998288889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MKKRRKVTSNLEKIHLGYHKDSSEGNVAVECDQVTYTHSAGRPTPEALHCYQELPPSPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDA |
Prediction | 85645745452444215444443655445645544446455544464553575347667442314266104400520351047563000000205755040020000100420330047447553040560427004300300120404044730430140043041678 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCHHHHHHHHHHHHHHHCCCSSSSSSSSCCSSSSSHHHHHHHCCHHHHHHHHCCCCCCSSSSCCCCHHHHHHHHHHHSSSSSSSCHHHHHHHHHHHHHHCCCCC MKKRRKVTSNLEKIHLGYHKDSSEGNVAVECDQVTYTHSAGRPTPEALHCYQELPPSPDQRKLLSSLQYNKNLLKYLNDDRQKQPSFCDLLIIVEGKEFSAHKVVVAVGSSYFHACLSKNPSTDVVTLDHVTHSVFQHLLEFLYTSEFFVYKYEIPLVLEAAKFLDIIDA | |||||||||||||||||||
1 | 3bimA | 0.26 | 0.16 | 5.08 | 1.00 | DEthreader | ----------------------------------------------------------SQ-IQFT--RHASDVLLNLNRLRSRD-ILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDKRNLSVINLPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHV | |||||||||||||
2 | 2vpkA | 0.29 | 0.18 | 5.38 | 1.59 | SPARKS-K | ----------------------------------------------------------------SMSHHCEHLLERLNKQREAG-FLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEV | |||||||||||||
3 | 3hqiA | 0.17 | 0.16 | 5.41 | 1.16 | MapAlign | ---FSFCREEMGEVIKSSTFSSNDKLKWCLRVNPKGLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWE-NSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFE--HKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERL | |||||||||||||
4 | 6w66C | 0.25 | 0.16 | 5.09 | 0.85 | CEthreader | -----------------------------------------------------------RTFSYTLEDHTKQAAGIMNELRLSQ-QLCDVTLQVKYAQFMAHKVVLASSSPVFKAMFTNGLRMEVVSIEGIHPKVMERLIEFAYTASISMGEKCVLHVMNGAVMYQIDSV | |||||||||||||
5 | 3ohuA | 0.36 | 0.24 | 7.19 | 1.48 | MUSTER | ------------------------------------------------------GPLGSPMYVYESTVHCTNILLGLNDQRKK-DILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKDLVVSLEEVTARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNL | |||||||||||||
6 | 3hqiA | 0.19 | 0.17 | 5.48 | 2.45 | HHsearch | VQGKDWGFKKFRREANGLLP---DDKLTLFCEVSVVQDSVNISGQNT-MNMVKVPECR--------------LADELGGLWEN-SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEH--KKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERL | |||||||||||||
7 | 3ga1B | 0.30 | 0.19 | 5.89 | 1.89 | FFAS-3D | -----------------------------------------------------------QTLQMEIPNFGNSILECLNEQR-LQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEI | |||||||||||||
8 | 3hqiA | 0.18 | 0.16 | 5.36 | 1.35 | EigenThreader | KLNPKGLDSKDYLSLYLLLVSCPQGKDWGFKK-FIRRGFLLDEANGLLPDDKMNMVKVPECR----------LADELGGLWEN-SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMF--EHKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERL | |||||||||||||
9 | 3hqiA | 0.21 | 0.18 | 5.59 | 1.29 | CNFpred | ---------FLLDEANGLLP---DDKLTLFCEVSVVQDSVNISGQNTM-NMVKVPEC--------------RLADELGGLWENS-RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEH--KKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERL | |||||||||||||
10 | 4cxiA | 0.27 | 0.17 | 5.24 | 1.00 | DEthreader | ----------------------------------------------------------FS-YTLE--DHTKQAFGIMNELRLSQ-QLCDVTLQVKAAQFMAHKVVLASSSPVFKAMFTNLREMEVVSIEGIHPKVMERLIEFAYTASISMGEKCVLHVMNGAVMYQIDSV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |