Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540
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| SS Seq | CCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCSSSCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC MATDTSQGELVHPKALPLIVGAQLIHADKLGEKVEDSTMPIRRTVNSTRETPPKSKLAEGEEEKPEPDISSEESVSTVEEQENETPPATSSEAEQPKGEPENEEKEENKSSEETKKDEKDQSKEKEKKVKKTIPSWATLSASQLARAQKQTPMASSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRGVIKQVKGKGASGSFVVVQKSRKTPQKSRNRKNRSSAVDPEPQVKLEDVLPLAFTRLCEPKEASYSLIRKYVSQYYPKLRVDIRPQLLKNALQRAVERGQLEQITGKGASGTFQLKKSGEKPLLGGSLMEYAILSAIAAMNEPKTCSTTALKKYVLENHPGTNSNYQMHLLKKTLQKCEKNGWMEQISGKGFSGTFQLCFPYYPSPGVLFPKKEPDDSRDEDEDEDESSEEDSEDEEPPPKRRLQKKTPAKSPGKAASVKQRGSKPAPKVSAAQRGKARPLPKKAPPKAKTPAKKTRPSSTVIKKPSGGSSKKPATSARKEVKLPGKGKSTMKKSFRVKK |
1 | 5vkqA | 0.07 | 0.06 | 2.59 | 1.43 | EigenThreader | | HIAAMYSREDVVKLLLTKRGVDPFSTG----GSRSQTAVHLVSSRQTGTATNILRALLAAAGKDIRLKADGRGKIPLLLAVESGNQSMCRELLAAQTAEQLKATTANGDTALHLAARRRDVDMVRILVDYGGARSIHTAAAYGHKGEKVDVTTNDNYTALHIAVESALHMACRACHPDIVRHLIETVKEKHKIPESDKQIVRMLLENHYCAVAGNNDVNRQSSVG--------WTPLLIACHRGHHARVDVFDTEGRSALHLAAERGALHLAAMNGFTHLVKFLIKDHNAVIDILQTPLHLAAASGLLELGAN---------------IDATDDLGQKPIHVAAQNAKLFLQQTSKDGNTCAHIAAMQG------SVKVIEELMKFDRSGVISAATPLQLAAEGGH------ADVVKALVRAGASCTEENKAGFTGHGQVLDVLKSTNSLRINSKKLGLTPATVKSETPTGQSLFGDLGTESGMTLLLNSAGVQVDAATIENGYAELLQSQDRNGRTAEINATDRNGWTGASPKSETNYGCAAIWFAASEGHN |
2 | 3wvfA | 0.06 | 0.04 | 1.63 | 1.37 | MapAlign | | LISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRDGPDNVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPHTFRGAAYSTPDEKYEKYKFDTIANENLNISSKGGWVGTNNFYTANLGNGIAAIGYKWFISQPLFKLLKWIHS-FVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRM-----------------------------------------------LQPKIQAMRERLGDDKQRISQEMMALYKAEKV-NPLLIQMPIFLALYYMLMGSVEL-RQAPFALWIHDLS-------AQDPYYILPILMGVTMF---FIQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQ---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 2rqpA | 0.97 | 0.15 | 4.31 | 2.29 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------GPGMASSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRGVIKQVKGKGASGSFVVVQKSRKT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 3wvfA | 0.10 | 0.07 | 2.65 | 0.69 | CEthreader | | GLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPHTFRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATADGTNNFYTANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMA--KMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPY--YILPILMGVTMFFIQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQ------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 4pjuA | 0.05 | 0.05 | 2.30 | 1.20 | EigenThreader | | VFVHRYRDAIAEIRAICIEEIGIWKYSDAFLNDSYLKYVGWTHDKQGEVRLKCLTALQGLYYNKETLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFYLVDSWDCATELLKTIRQAAECHPPVGRGTRVLTITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTKHLDALLRQIRNIVEKHTD----TDVLEA------------CSKTYHALCNEEFTIQEEPDEDDAYQVLSTLKRITAFHNAHKLLKTGIENGDPEQIVIHALQCTHYVILWQLAKISTKEDLLRLKKQRVFCQICQHYLTNNTTVKEQAFTILCDILIFSHQISSELLSFILDHVFIEAALHKRRNLLAAFCKLIVYTVVENTAQYKYYN---------DYGDIIKETSKTRQIDKIQCAKTLILSLQQLFNEIQFDRSSSTFSGIKELARRFALTFTREAIALHKDGIEFAFKEPNQGEPPLNLAFLDILSEFSSKLLKFTFQSLRREDVWLPLSYRNSLL-------------- |
6 | 2rqpA | 0.98 | 0.15 | 4.31 | 0.80 | FFAS-3D | | ------------------------------------------------------------------------------------------------------------------------------------------------------PGMASSPRPKMDAILTEAIKACFQKSGASVVAIRKYIIHKYPSLELERRGYLLKQALKRELNRGVIKQVKGKGASGSFVVVQKSRKT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4ewcA | 0.13 | 0.10 | 3.44 | 0.73 | SPARKS-K | | ---------------------------GTYSFDVRDNTLVVRRSTATSGI---KISYREDRGLLQKAVYVDKKIRKFLEEEKAV------------------------AAAIERSVEFDNFSKEAAANI-----------------------EAGVSNAYNLSLFIGV-----------FPALTTFFSAILSEGESIWQNGQAIRILALADETKLNVVTAN----GKVKQVENLNDLKAAFRQSKRSDYRKGQGSKATALIKSVLSADQLFAPGNASYTTLAKYLRHRNCALDLGKKSKIFSIIQKKVRGRCR----TEEQRLLTSALKISDGENKF--QRIDTLCTSFLIDPPRTTKCPISSL--YIQEGNSVLADF---KNGEDACKICREAKLKVGVNST-FTSVARTCVAVSVATAFCSPGSERYRSNIKANTTKPKKDSTYTIQGLRSNVRYEAR--PEDRSWQVNVTDSFGGLAVFNALVKRILKSASERSARAVKTFVGEQGK---SAI-VISGVGLFSIDF------------------------ |
8 | 6xu2A | 0.14 | 0.04 | 1.43 | 0.69 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------VAGESALDRMACGLGGK--LVLPMIKEHIMQMNPDWKYRHAGLMALSAIGEGCHQQMEG----------------------------------------ILNEIVNFVLLFLQDPRYAACNAVGQMATDFAPGFQKKFHEKVIAALLQTMEDQ--------------------------GNQRVQAHAAAALINFTE--DCPKSLLIPYLDNL-----VKHLHSIMVLKLQELIQKGTKLVLE-------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 6sytA | 0.07 | 0.04 | 1.53 | 0.50 | DEthreader | | --------------------------GGGGGGGGGGGGG-G-----GGGGGGGGGG-------TNFRDTVVWLQSETVRSIGVGNLTLEAVHAQALTTIGLSPTVFALSKNMNLGISHKFCKGLLCCRVQLVHRFIGDAW--IIIRSLAAHTLNPDQDVQWTTADNDEGHG-----------------AG-EKADFNYLLLPGENINLDMKKL----CQSITENVVYLKSAENTED----LF-EALRSCKQH---F-KKKLTLAKWIQAEWKISGQLKQV-------------TL--NILTLI-ELP--S---ESESTVHGEPFIGQLYHL-SVQAPEVAKSWAALASWAYRWGRKVVSLYKLSCSAYFTFLNASTDDMIVMATLRLL--------R-LLVKHAGEL-------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 5zqzA | 0.06 | 0.05 | 2.19 | 1.18 | MapAlign | | SEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKIVYKKVEEKVRKQTYPAPLKIIDVVKTQKFGELVMTKESKLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDLEIITTEKTSKDTSASAVAVGLKQGKVIIVVGFYTTRCLAPMMILQEGVPLDSLTTSFGFPVGAATL---VDEVGVDVAKHVAEDLGGERFGGGNPELLTQMVSKVSSDEDIQFRLVTRFVNEAVMCLQEGILIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHANSPNKK------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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