Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCSSCCCSSSSCCCCCSSSSCHHHHHHHHHHHHHHHHHHCCCSSSSSSSSSSCCCCCSSSSSSSSSSSSCCSSSCCCCCCCCCCCCCSSCSSSSSSSCCCCCSSSSSSSSSCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC MYQPSRGAARRLGPCLRAYQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKGEEGPGPELHSGCLDGLRSLFEGPPCPYPGAWIPFQVPGTAHPSPATPSGDPSMEEHLSVMYERLRQELPKLFLQSHDYSLYSLDVEFINEILNIRTKGRTWYILSLTLCRFLAWNYFAHLRLEVLQLTRHPENWTLQARWRLVGLPVHLLFLRFYKRDKDEHYRTYDAYSTFYLNSSGLICRHRLDKLMPSHSPPTPVKKLLVGALVALGLSEPEPDLNLCSKP |
1 | 3rgaA | 0.11 | 0.10 | 3.52 | 0.57 | CEthreader | | HMPAETVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPALRGAVHEEPGRPYAAHDGTSVVLPATVTVGAPGAPPQRRGRTRVMGVIEVGEDGLIREMRVMWGVTDSSWTARPAP-------DEERRKELAREHCLRINDGDVDGLLKL--YSPRIRFEDPVGSWTRTGLEALRAHATMAVGS------NVRETAGLTVAGQDGRHAAVTVSATMDYLPSGPLLARHHLMTLALIGIEYVMVIGVDADGLIDEMRAYWGATDVSLLDP--------------------------- |
2 | 4wykA | 0.08 | 0.06 | 2.52 | 0.77 | EigenThreader | | -ELKPEQVEQLKLIMSKRYDGSQQLKGLRSDPDLVAQNIDVVLNRLRIIEENIPELLSSNNRLYRLDDMSSIVQKAP--NLKILNLSGNELKSERELDKIKGLKLESAIRERFPKLLPPPIAFDVEAPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDS-----GDRQGLLDAYSLSIPFIDSRNNVVAFLNEL---------------PKTQHDVNAQTSTLLCFNGVFKEVDGK---------SRD----SLRAFTRTFIAVNSGCIVNDELFVRNAS-------------SEEIQRAFA----------- |
3 | 3gzbA | 0.13 | 0.06 | 2.08 | 0.70 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------ASLVIPVSAQANSGEPQEQQLAVKYDALEHDYKTL------ITFYNRDSIFFDKTANRKYTGGRFIIDFLERA----HQGVLEYDFNIEHYNAGSLVVIGNYHFKGPG--------EQFGKPGKIIDVAIPAVTSLKLDLNRRVTEHVD---LIDYQTSDQLAQ------------------------ |
4 | 3rgaA | 0.12 | 0.10 | 3.67 | 0.99 | SPARKS-K | | HMPAETVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPALGAVHEEPGRPYAAHDGTSVVLPATVTVGAPG-------APRRGRTRVMGVIEVGEDGLIREMRVMWGV----TDSSWTARPAPDEERRKELAREHCLRINDGLLK-----LYSPRIRFEDPVGSWTRTGLEALRAHATMAVGS------NVRETAGLTVAGQDGRHAAVTVSATMLPSGPLLARLMTLDPHRALIGIEYVMVIGVDADGLIDEMRAYWGATDVSLLDP--------------------------- |
5 | 3msoA | 0.09 | 0.04 | 1.43 | 0.96 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------TSLPLEANAAATLAEWHGLIARRDL----PRLLHPDAVFRSPMAHKPYAGAPVVSMILNTVLTVF------EDFAYHRQLASADGRSVVLEFSARVG-----------------ERELKGIDMIRFDDDGRIVDFEVMVRP---------MSGLQALGEEMGR------------- |
6 | 6z2wE | 0.08 | 0.06 | 2.23 | 0.67 | DEthreader | | --------IT-LTSWTVILGRLCLMDNWY----SLSGYLRLSTFLQSQK-----DASDNAFIYAPKHLNDEKSDLILKKPYTTL---------RST-DLIPIFANNLKS-N----------QNLDDIEVLLLLTSHRNLDSRMEFSTDSFERSALTYIGDIDSDYSEDHQLKKQLM------------RIGADFSKSRKRSLGI--------LYQFLFPD-----PINWFARYAYAAMVGHIL--GLGDRHCENILLDI-----------------QTGKVLHVDLDCLFEALKVLRNKIR-------------- |
7 | 3rgaA | 0.10 | 0.08 | 3.07 | 0.87 | MapAlign | | ---PAETVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPALRGAVHEEPGRPYAAHDGTSVVLPATVTVGAPGAPPQRRGRTRVMGVIEVGEDGLI----------REMRVMWGVTDSSWTARPAPDEERRKELAREHCLRINDGDVDGLLYSPRIRFEDPVGSWTRTGLEALRAHATMAV------GSNVRETAGLTVAGQDGRHAAVTVSATMDYSGPLLARPAPADPHRALIGIEYVMVIGVDADGLIDEMRAYWDVSLLD------------------------------- |
8 | 3rgaA | 0.12 | 0.10 | 3.57 | 0.59 | MUSTER | | -HMPAETVRKEVALECRRVNAGELEGVLQLFAP---VDPLGTEPVVGRAALAARLAPALRGAVHEEPGRPYAAHDGTSVVLPATVTVGAPGAP-PQRRGRTRVMGVIEVGEDGL------EMRVMWGVTDSSWTARPAPDEERRKELAREHCLRINDDVDGLL------KLYSPRIRFEDPVGSWTRTG------LEALRAHATMAVGSNVRETAGLTVAGQDGRAVTVSATMDYLPSGPLLARH-PADPHRALIGIEYVMVIGVDADGLIDEMRAYDVSLLDP------------------------------- |
9 | 5z3rF | 0.11 | 0.04 | 1.60 | 0.93 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------VSPVVAASQNSWRCVQSDREGWL------ALMADDIVVEDPIGEAVVRGKAALAAFYDTNI----GPN-RLRVTCEATFPSSSPTEIAYILVLETTF---------P---NGFVATVRGVFTYRVDDAGLITNLRGY---WNMDAMTFTEA------------------------ |
10 | 3i0yA | 0.13 | 0.06 | 1.97 | 0.48 | CEthreader | | -----------------------------------------------------------------------------------------------------------------------------------------------SESNRQRATGLVQAYYEAFNRGDWDLAFLAEDVAHDLNQGP-REIGRAAFASFLQRND------SYREQLRDIVVTANDEGTRVGAEYVVHG---VYHTTDEGLPDANGQTYVLPGGAFFDVR-DGQITRVTNYYNLQEWIAQVSR-------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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