Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
| | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCSSSSSSSCCCCCCSSSSSSSCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCSSSSSCSSCCCCCCHCHHHHHHHHHHHHHHHCCCCCCCCCCSSCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSSCCCCSSSSSSCCCCCCCCCCCSSSSSSCCSSSSSSSSSCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCHHHHHHHHHHHHCCCCCCCCCCCSSCCCCCCCCCCCSSSSSSSSSSSHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSCCCSCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHSSCCC MGLSRKEQVFLALLGASGVSGLTALILLLVEATSVLLPTDIKFGIVFDAGSSHTSLFLYQWLANKENGTGVVSQALACQVEGPGISSYTSNAAQAGESLQGCLEEALVLIPEAQHRKTPTFLGATAGMRLLSRKNSSQARDIFAAVTQVLGRSPVDFWGAELLAGQAEGAFGWITVNYGLGTLVKYSFTGEWIQPPEEMLVGALDMGGASTQITFVPGGPILDKSTQADFRLYGSDYSVYTHSYLCFGRDQMLSRLLVGLVQSRPAALLRHPCYLSGYQTTLALGPLYESPCVHATPPLSLPQNLTVEGTGNPGACVSAIRELFNFSSCQGQEDCAFDGVYQPPLRGQFYAFSNFYYTFHFLNLTSRQPLSTVNATIWEFCQRPWKLVEASYPGQDRWLRDYCASGLYILTLLHEGYGFSEETWPSLEFRKQAGGVDIGWTLGYMLNLTGMIPADAPAQWRAESYGVWVAKVVFMVLALVAVVGAALVQLFWLQD |
1 | 3cj9A | 0.47 | 0.38 | 11.13 | 1.17 | DEthreader | | -------------------------------------P-ALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWV---WIRPRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIH----RFHPCWPKGYSTQVLLQEVYQSPCTMG--Q--R-AIVSLSGTSNATLCRDLVSRLFN-ISSCPFSQCSFNGVFQPPVAGNFIAFSAFYYTVDFLTTLPVGTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFQKKAADTAVGWALGYMLNLTNLIPADLP-------------------------------------- |
2 | 3cj9A | 0.46 | 0.39 | 11.37 | 4.03 | SPARKS-K | | --------------------------------------PALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKG-TLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIHR----FHPCWPKGYSTQVLLQEVYQSPCT-----MGQRAIVSLSGTSNATLCRDLVSRLFNISSCPFS-QCSFNGVFQPPVAGNFIAFSAFYYTVDFLTTVMGLTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFQKKAADTAVGWALGYMLNLTNLIPADLPGLRKGTHF------------------------------ |
3 | 3cj9A | 0.47 | 0.39 | 11.37 | 1.74 | MapAlign | | --------------------------------------PALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWI-RPRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQ----IHRFHPCWPKGYSTQVLLQEVYQSPCTM-----GQRAIVSLSGTSNATLCRDLVSRLFNISSCP-FSQCSFNGVFQPPVAGNFIAFSAFYYTVDFLGLPV-GTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFQKKAADTAVGWALGYMLNLTNLIPA----------DLPGLRKGTHF-------------------- |
4 | 3cj9A | 0.46 | 0.39 | 11.37 | 1.18 | CEthreader | | --------------------------------------PALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRP-RKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQI----HRFHPCWPKGYSTQVLLQEVYQSPCTMGQR-----AIVSLSGTSNATLCRDLVSRLFNISSCP-FSQCSFNGVFQPPVAGNFIAFSAFYYTVDFLTTVMVGTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFQKKAADTAVGWALGYMLNLTNLIPADLPGLRKGTHF------------------------------ |
5 | 3cj9A | 0.46 | 0.39 | 11.37 | 2.71 | MUSTER | | --------------------------------------PALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRP-RKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIH----RFHPCWPKGYSTQVLLQEVYQSPCT-----MGQRAIVSLSGTSNATLCRDLVSRLFNISSCPFS-QCSFNGVFQPPVAGNFIAFSAFYYTVDFLTTVMGLTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFQKKAADTAVGWALGYMLNLTNLIPADLPGLRKGTHF------------------------------ |
6 | 3cj9A | 0.46 | 0.39 | 11.37 | 4.14 | HHsearch | | --------------------------------------PALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIR-PRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQI----HRFHPCWPKGYSTQVLLQEVYQSPCTMG-----QRAIVSLSGTSNATLCRDLVSRLFNISSCPFS-QCSFNGVFQPPVAGNFIAFSAFYYTVDFLTTVMGLTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFQKKAADTAVGWALGYMLNLTNLIPADLPGLRKGTHF------------------------------ |
7 | 3cj9A | 0.46 | 0.38 | 11.15 | 3.52 | FFAS-3D | | --------------------------------------PALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGR-WIRPRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIHR----FHPCWPKGYSTQVLLQEVYQSPCTMGQRA-----IVSLSGTSNATLCRDLVSRLFNISS-CPFSQCSFNGVFQPPVAGNFIAFSAFYYTVDFVMGLPVGTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFQKKAADTAVGWALGYMLNLTNLIPADLPGLRKGTH------------------------------- |
8 | 3cj9A | 0.42 | 0.34 | 10.04 | 1.85 | EigenThreader | | --------------------------------------PALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENF-------IKYRPRKGTLGAMDLG-GASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIH-----RFHPCWPYSTQVLLQEVYQSPC------TMGQRAIVSLSGTSNATLCRDLVSR-LFNISSCPFSQCSFNGVFQPPVAGNFIAFSAFYYTLTTVMGLPVGTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFR--EVVFQAADTAVGWALGYMLNLTNLIPADLPGLRKGTHF------------------------------ |
9 | 4cd3A | 0.46 | 0.39 | 11.37 | 3.78 | CNFpred | | ----------------------------------------LKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFEFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIR-PRKGTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYGQHYRVYTHSFLCYGRDQILLRLLASALQIH----RFHPCWPKGYSTQVLLQEVYQSPCTMGQRP---SAIVSLSGTSNATLCRDLVSRLFNISSCPF-SQCSFNGVFQPPVAGNFIAFSAFYYTVDFLTTLPVGTLKQLEEATEITCNQTWTELQARVPGQKTRLADYCAVAMFIHQLLSRGYHFDERSFREVVFSKKAADTAVGWALGYMLNLTNLIPADLPGLRKGTHF------------------------------ |
10 | 4a5bA | 0.17 | 0.15 | 4.78 | 1.17 | DEthreader | | -----------------------------------RCHDSLQALVVIDAGSSSTRTNVFLAKTRC-SIDPDSIQLIREGKRFTGLRVVLEEGAKLMQLLEEDTVAILDQLQKVVKAGIPVMLCSTAGVRDF--HEWY-RDALFVLLRHLINNPKFFTNWTRPITGAEEGLFAFITLNHLSRRLGEDPARSMIVKHSRNDLAGVVEVGGASAQIVFPLGTVLSSVRAVNLLLPRYPSADVVSVSFMQLGMASSAGLFLKELCSNDLQGICSNPCLFKGFQQSCSAVNRLKPLAYCSVPKPERMKICIIEGTGNFDKCVSQVESILVAPKLPASSGFESVDQVFASSTAPMFITGRMLASIDTLKLRSDFSGDELAEAAREFCSSEVPVIQGEQK-LNSLNFDLCKTMALTVSLLRHMAAGENQPSFIKWEKSIAKPLDLGWQVGVILHHVLFTEEWGRTAYEAG-------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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