Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCSSSCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRLGLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLKKDKSMEWFTGSEE |
1 | 7bvcB | 0.06 | 0.04 | 1.86 | 0.67 | DEthreader | | ------RDRAGPDCQR--------------------VGLTLQRT-GY-PDPNLR----F-SPEDPFGWYYNVL-LPDLICLICWLGLVLLGAWMPFNNGLRPEGQIAG----AAFTLGIGLIAVAA--ENLRYYLIGRRVAFVFTAMCL-PSLMMALMGIIFATMFFL---MFTPTKWIHHF------------WYVSNGAPFNP-V-ISAFFALSAAPIPVAGFMVVMMA-S----------------------MAIGVVR-QYPTYSLADDVLVEPSAEAGTDYDTWQDGGLLGTASVMSLRKFDTVV-AP |
2 | 5npkb | 0.06 | 0.05 | 2.26 | 0.73 | EigenThreader | | LADCSSKSPEECEIFLVEGTGIGGDFDLAKARYHGYKGLGEMNADQLWETTMNPEH---RALLQVKDAIEADQTFEMLMGDSFLDYAMSVIVARALPDVRDGLK---------------PVHRRILYGLNEQGMTPDSARIVGDVMGKYHPHG-------DSSIYEAMVRMAQTEARMTLELLRLLANGVGMATIPPHNLTELINGVLSLSKNPDISIAELMEDIEG-PDFPTAGLILGKSGIRRAYETGGRQRIVVTEP------------FQVNKARMIEKIAELVRDKKIDGTSLRTGVRVVIDVRKDAN |
3 | 5uq1B | 1.00 | 0.43 | 11.99 | 2.35 | SPARKS-K | | ------------------------------------------------------------------QRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS----------------------------------------------------------------------------------------------------------------- |
4 | 5uq1B | 1.00 | 0.42 | 11.90 | 1.16 | MapAlign | | -------------------------------------------------------------------RQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS----------------------------------------------------------------------------------------------------------------- |
5 | 5uq1B | 1.00 | 0.43 | 11.99 | 1.11 | CEthreader | | ------------------------------------------------------------------QRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS----------------------------------------------------------------------------------------------------------------- |
6 | 5uq1B | 1.00 | 0.43 | 11.99 | 1.54 | MUSTER | | ------------------------------------------------------------------QRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS----------------------------------------------------------------------------------------------------------------- |
7 | 5uq1B | 1.00 | 0.43 | 11.99 | 9.10 | HHsearch | | ------------------------------------------------------------------QRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS----------------------------------------------------------------------------------------------------------------- |
8 | 5uq1B | 1.00 | 0.43 | 11.99 | 2.14 | FFAS-3D | | ------------------------------------------------------------------QRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS----------------------------------------------------------------------------------------------------------------- |
9 | 5uq1B | 1.00 | 0.43 | 11.99 | 1.77 | CNFpred | | ------------------------------------------------------------------QRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERS----------------------------------------------------------------------------------------------------------------- |
10 | 6g7eB | 0.05 | 0.03 | 1.54 | 0.67 | DEthreader | | SHYKERDAKAAITILVQLFT-----------ESGRAKVVNLFCVEVAETPEHLSQKEQQIRLATFRETF-QIEPFKIP-VAIKAELRQ--DGLGKTLQTICIVAS-DH--HQRAEEFA------KL-PSLI-ICPPLSGHWQQEIKTYAP--FL-TVT-LDKTDIV-IE-YNWNYCVLDGRLIFLVLPFLLR--RLKE-KILQ-NYYCDLSDLQRK------------------LQYRKLCNSLCQTTHDNPQKDLQADRAH-KK-V---------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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