Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCSSSCCCCSCSCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCSCCCCSSSSSCCCCCSSSSSCC GPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGSKGSQGPKGSRGSPGKPGPQGSSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAVVPLALQNEPTPAPEDNGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWIKKQMVGRESHWIGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDFQCEDVNNFICEKDRETVLSSAL |
1 | 5ao5A | 0.23 | 0.11 | 3.37 | 0.67 | DEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------GNSHGK--------DGHLWCWGFCPTFWDKDDSCYQFNSTLS-WREAWASCEQQGADLLSITEIHEQTYINGLLTGYSSTLWILNDLDTSGGWQWSDNSPLKYLNWESDQPDNP----SEENCGVIRTESSGWQNRDCSIALPYVCKKKP-------- |
2 | 5ao5A | 0.18 | 0.16 | 5.39 | 0.76 | MapAlign | | ---------DLCALPYHEVYTIQGNSHGKPCTIPFKYDNQWFHGCTSTGREDGHLWCATTQDYGKDERWGFCPIKSNDCETFWDKDQLTDSCYQFNFQSTLSWREAWASCEQQGADLLSITEIHEQTYINGLLTGYSSTLWIGLNDLDTSGGWQWSDNSPLCEPSWQPFQGHCYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKQKQEVEELWIGLNDLKLQMNFEWSDGSLVSFTHWHPFEPNNF---RDSLEDCVTIWGPGRWNDSPCNQSLPSICKKAGQL------ |
3 | 2ox9C | 0.89 | 0.39 | 10.99 | 2.08 | SPARKS-K | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------CPPHWKNFTDKCYYFSLEKEIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTVGRESHWIGLTDSEQESEWKWLDGSPVDYKNWKAGQPDNWGSGHGPGEDCAGLIYAGQWNDFQCDEINNFICEKEREAV----- |
4 | 5ao5A | 0.17 | 0.16 | 5.43 | 0.43 | CEthreader | | TSTGREDGHLWCATTQDYGKDERWGFCPIKSNDCETFWDKDQLTDSCYQFNFQSTLSWREAWASCEQQGADTEIHEQTYINGLLTGYSSTLWIGLNDLDTSGGWQWSDNSPLKYLNWESDQPDNPSEENCGVIRTESSGGWQNRDCSIALPYVCKKKPKVECEPSWQPFQGHCYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKQVEELWIGLNDLKLQMNFEWSDGSLVSFTHWHPFEPNNFRDS---LEDCVTIWGEGRWNDSPCNQSLPSICKKAGQLS----- |
5 | 2ox9C | 0.89 | 0.39 | 10.99 | 1.16 | MUSTER | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------CPPHWKNFTDKCYYFSLEKEIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTVGRESHWIGLTDSEQESEWKWLDGSPVDYKNWKAGQPDNWGSGHGPGEDCAGLIYAGQWNDFQCDEINNFICEKEREAV----- |
6 | 5xtsA | 0.16 | 0.13 | 4.38 | 1.03 | EigenThreader | | ---------------------------------------TRQFLDHKCNQDAESQKSESQAFKPSKTDWCDSKSEFQKDTGEDLGNRQEKNIMGSGLWSRWKIYGTTDNLCSRGYEAMYTLLGNANGATCAFPDCTSAGRSDGWLWCGTTTDPLKFEGSESLWNKDP-LTSVSYQINSKSALWHQARKSCQQQNAELLSITEIHEQTYLTGLTSSTSGLWIGLNSLSFNSGWQWSDRSPFRYLNWLPGSPSAEPGK-----SCVSLNP-GKNACVQK---LGYICKKIPSESDVPTH |
7 | 2ox9C | 0.89 | 0.39 | 10.99 | 1.29 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------CPPHWKNFTDKCYYFSLEKEIFEDAKLFCEDKSSHLVFINSREEQQWIKKHTVGRESHWIGLTDSEQESEWKWLDGSPVDYKNWKAGQPDNWGSGHGPGEDCAGLIYAGQWNDFQCDEINNFICEKEREAV----- |
8 | 5xtsA | 0.21 | 0.20 | 6.32 | 1.29 | HHsearch | | GIKGEDL-FFNYGNRKNIMLYKGSGLWSIYGTTDNLCSRGYEMYTLLGNANGATC--AFPFFENTSAGRSDLFGYCPLKFEGESLWNKLTSVISKSAQQNAELLTGLTSSLTSGLWIGLNSLDRSPFRNWLPGSPSAEGKSCVSLGYICKKIPSESDVPTHCPSQWWPYAGHCYKIHRDKKIQRDALTTCRKEGGDLTSIHTIEELDFIISQLGYNDELWIGLNDIKIQMYFEWSDGTPVTFTKWLRGEPSHENN---RQEDCVVMKGDGYWADRGCEWPLGYICKMKS-------- |
9 | 2ox8A | 1.00 | 0.43 | 12.07 | 3.14 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------CPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWIKKQMVGRESHWIGLTDSERENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDFQCEDVNNFICEKDR-------- |
10 | 5ao5A | 0.22 | 0.16 | 5.20 | 1.00 | EigenThreader | | -------------------------------------------------------------------EPNVFLIGLQACNTSLPAQRGTMGWPGTASLCDREALNLRWHCRTLGDQLSLLLGAGQWGSEEDLCALPYHEVYTIQGNSHGKPCTIPPIKSNDCETFWDKLTDSCYQFNF--QSWREAWASCEQQGADLLSITEIHEQTYINGLLTGYSSTWIGLNDLDTSGGWQWSDNSPLKYLNWESDQPDNP-----SEENCGVIRT---ESSGGCSIALPYVCKKKPKVECEPSW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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