>Q5K4L6 (490 residues) MAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEG PEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFPLSPGATVALLLP AGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARALVLAPEFLESLEPDLPAL RAMGLHLWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCLYIFTSGTTGLP KAARISHLKILQCQGFYQLCGVHQEDVIYLALPLYHMSGSLLGIVGCMGIGATVVLKSKF SAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGHKVRLAVGSGLRPDTWERFVRR FGPLQVLETYGLTEGNVATINYTGQRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQG HCMATSPGEPGLLVAPVSQQSPFLGYAGGPELAQGKLLKDVFRPGDVFFNTGDLLVCDDQ GFLRFHDRTG |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | MAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARALVLAPEFLESLEPDLPALRAMGLHLWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCLYIFTSGTTGLPKAARISHLKILQCQGFYQLCGVHQEDVIYLALPLYHMSGSLLGIVGCMGIGATVVLKSKFSAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGHKVRLAVGSGLRPDTWERFVRRFGPLQVLETYGLTEGNVATINYTGQRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQGHCMATSPGEPGLLVAPVSQQSPFLGYAGGPELAQGKLLKDVFRPGDVFFNTGDLLVCDDQGFLRFHDRTG |
Prediction | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCSSSSSCCSSSSHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCHHHHHHHHHHHHHCCSSSCCCCCCCHHHHHHHHHHCCCSSSSSCHHHHHHHHHHHHHCCCCSSSSSSCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCSSHHHHHHHHHHHHHHHHCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHCCSSSSCCCCCHHHHHHHHHHHCCCSSSCHHHHHHHHHHCCCCCCCCCCCSSSSSSCCCCHHHHHHHHHHHCCCCSSSSSCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCSSSCCCCCSSSCCCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCSSSSCCCSSSSCCCCCSSSSSCCC |
Confidence | 9615689999999999999998888778999999899998721368888764124687899889979999999999749983999899888499999999999999399999789997899889999999999819199704812577899999985298199985217999999987578861799973787777650307888641577778743357899888499982698888880003139999999999999699999789995154268889999999998376899779999999999999979979982299999999299997656775699994799999999999997997299987168788522348999996532455556678705899758988466579997433799984489851379988786579989989999861456788455246379983898689981589 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | MAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARALVLAPEFLESLEPDLPALRAMGLHLWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCLYIFTSGTTGLPKAARISHLKILQCQGFYQLCGVHQEDVIYLALPLYHMSGSLLGIVGCMGIGATVVLKSKFSAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGHKVRLAVGSGLRPDTWERFVRRFGPLQVLETYGLTEGNVATINYTGQRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQGHCMATSPGEPGLLVAPVSQQSPFLGYAGGPELAQGKLLKDVFRPGDVFFNTGDLLVCDDQGFLRFHDRTG |
Prediction | 4000011201320010000023021020012001000200203330232033244243631434100010124105623521000034131003001410210020030332000000000000000000000000000000012022400210051040000000240141035006605333010000144343420330143146325542353335623130000001013114201000000000000000000040343000000000000000000000001000000003402063005103624000000010000000511626622101000000000004005202730621300000100000000001345310000001213321411002022625230215733436044210000013031200024316336102520353123523040001000000021000113335 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCSSSSSCCSSSSHHHHHHHHHHHHHHHCCCCCCSSSSSCCCCHHHHHHHHHHHHHCCSSSCCCCCCCHHHHHHHHHHCCCSSSSSCHHHHHHHHHHHHHCCCCSSSSSSCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCSSHHHHHHHHHHHHHHHHCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHCCSSSSCCCCCHHHHHHHHHHHCCCSSSCHHHHHHHHHHCCCCCCCCCCCSSSSSSCCCCHHHHHHHHHHHCCCCSSSSSCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCSSSCCCCCSSSCCCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCSSSSCCCSSSSCCCCCSSSSSCCC MAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARALVLAPEFLESLEPDLPALRAMGLHLWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCLYIFTSGTTGLPKAARISHLKILQCQGFYQLCGVHQEDVIYLALPLYHMSGSLLGIVGCMGIGATVVLKSKFSAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGHKVRLAVGSGLRPDTWERFVRRFGPLQVLETYGLTEGNVATINYTGQRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQGHCMATSPGEPGLLVAPVSQQSPFLGYAGGPELAQGKLLKDVFRPGDVFFNTGDLLVCDDQGFLRFHDRTG | |||||||||||||||||||
1 | 7kdsA | 0.17 | 0.15 | 4.92 | 1.33 | DEthreader | -TPKEFFEQKGHIHDVNQYKQ------------------------GFFGPLAKELTVKWFLGGELNASYNCDRHAFANPDKPALICASHILTYGDLLREVSKVAGVLQIKKGDTVAVYLPMNAQAIIAMLAIARLGAAHSVIFAGFSAGSIKDRVNDASCKALITCDEIKKLCDEALVDC-PTVEKVLVYKRNIHLTRDYYWDVETAKFP-G-Y-LPP-VSVNSEDPLFLLYTSGSTGTPKGVVHSTAYLLGAALSTKYIDIHPEDILFTAGDVGWITGHTYALYGPLLLGVPTIIFEGTPYGRFWQIVEKHKATHFYVAPTALRLLRKEQIAKYDLSSLRTLGSVGPISPDIWEWYNEFGKQCHISDTYWQTESGSHLIAPVPNKPGSASYPF-F----GIDAALIDP--VTGVE-------IEGNDAEGVLAIKDHWPSMARTVYKNHTKYMDTYMNPYP----GYYFTGDGAARDHDGYYWIRGRVD | |||||||||||||
2 | 6oyfA2 | 0.19 | 0.16 | 5.13 | 2.09 | SPARKS-K | -----------------------------------------LGEAERHRLLVEWNDTAREHPRTVCVHELFEQQVERSPDAVALVYEGQQLSYRELDRQANRLARQLKVGPDERVAVCTERCLEMVVALLAVLKAGGAYVPLDPGYPAERLEYMLADSAPKVLLRQSGQ--TLE------PGAGVAVLALDG-----------EASQPWQAQPAQRLSDSGVQPHHLAYVIYTSGSTGRPKGVMVEHAGVVNRLLWMQRAYLQPQEAVLQKTPFGFDV-SVWEFFWPLAVGARLVMARPQDPAYLVETIVGQDIGTLHFVPSMLQAFVDSEGVQRCRGVRRIVCSGEALPGALARRLRQQLPQVELHNLYGPTEATVDVTAWACDAIPIGRPVDNT---------------TMYVLDAHGQP--VPTGVAGEIHIGGV--QVARGYLGRPELTRERFVPDPYAPGARLYKTGDLGRWLLDGTLEYLGRND | |||||||||||||
3 | 7kdsA | 0.16 | 0.15 | 5.01 | 0.76 | MapAlign | -KEFFERVNQYKQMYEQSIK----DPQGFFGPLAKELLSWDHDFHTVKSGTLKNGDAAWFLGGELNASYNVDRHAFANPDKPALICESHILTYGDLLREVSKVAGVLQIKKGDTVAVYLPMNAQAIIAMLAIARLGAAHSVIFAGFSAGSIKDRVNDASCKALITCDNIKKLCDEALVDC-PT-VKVLVYKRTILTGRDYYWDVETAKFP---G-YLPPVSVNSEDPLFLLYTSGSTGTPKGVVHSTAYLLGAALSTKIFDIHPEDILFTAGDVGWITGHTYALYGPLLLGVPTIIFEGPAYGRFWQIVEKHKATHFYVAPTALRLLRAGEEIAKY-DLSLRTLGSVGISPDIWEWYNEFGKNCHISDTYWQTESGSHIAPLANKPGSASYPF------FGIDAALIDPVTGVEI---------EGNDAEGVLAIKDHWPSMARTVYKNHTKYMDTYMNPY----PGYYFTGDGAARDHDGYYWIRGRVD | |||||||||||||
4 | 6m2oA | 0.20 | 0.17 | 5.34 | 0.39 | CEthreader | ---------------------------------------------------------VTPPPEKFNFAEHLLQTNRVRPDKTAFVDDISSLSFAQLEAQTRQLAAALGVKREERVLLLMLDGTDWPVAFLGAIYAGIVPVAVNTLLTADDYAYMLEHSRAQAVLVSGALHPVLKAALTKSDHEVQRVIVSRPAAPLEPGEVDFAEFVG---AHAPLEKPAATQADDPAFWLYSSGSTGRPKGVVHTHANPYWTSELRNTLHLREDDVCFSAAKLFFAYGLGNALTFPMTVGATTLMGERPTPDAVFKRWLGVKPTVFYGAPTGYAGMLAAPNLPSRDQVALRLASSEALPAEIGQRFQRHFG-LDIVDGIGSTEMLAAFLSNLPRYGTTGWPVP-----------------GYQIELRGDGGGPVADGEPGDLYIH--GPSSATMYWGNRAKSRDTF-------QGGWTKSGDKYVRNDDGSYTYAGRTD | |||||||||||||
5 | 3etcB1 | 0.20 | 0.18 | 5.61 | 1.66 | MUSTER | ----------------------------------SLLSQFVSKTDFESYEDFQENFKILVPENFNFAYDVVDVYARDSPEKLAMIWCEKIFTFKDLKYYSDKAANFF-IGKGDYVMLTLKSRYDFWYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEVPEQVDEAHAECGDIPLKKAKV-GGDVLEGWIDFRKELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYQNVEDDGLHYTVADSGWGKCVWGKLYGQWIAGCAVFVYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKE-DLSHYNFSTLKYAVVEPLNPEVFNRFLEFTGIK-LMEGFGQTETVVTIATFPWKPGSIGKPT---------------PGYKIELMDRDGR--LCEVGEEGEIVINTKPVGLFVHYGKDPERTEETWH-------DGYYHTGDMAWMDEDGYLWFVGRAD | |||||||||||||
6 | 6mfzA | 0.18 | 0.17 | 5.38 | 1.43 | HHsearch | NTHLF--D---EGMILRMVAQFEHLLLQAVHGLDQQVKRFELVTEDEKRDLFLRVNDTAKAYPNKLIMSMLEDWAAATPDKTALVFREQRVTYRELNERVNQLAHEKGVQPDDLVMLMAERSVEMMVAIFAVLKAGGAYLPIDPHSPAERIAYIFADSGAKLVLAQSPFVEKASM--------AEVVLDLNSA---------SS---YAAD---TSNPPLVNQPGDLVYVMYTSGSTGKPKGVMIEHGALLNVLHGMDEYPLLQDDAFLLKTT-YIFDISVAEIFGWVPGRGKLVILEPKNPKAIWQAVVGAGITHINFVPSMLIPFVEYLEGTEANRLRYILACGEAMPDELVPKVYEVLPEVKLENIYGPTEATIYASRYSLAKGSQES---------PVPIGKPLPNYRMYIINRHG--QLQPIGVPGELCIA--GASLARGYLNNPALTEEKFTPHPLEKGERIYRTGDLARYREDGNIEYLGRMD | |||||||||||||
7 | 1ba3A1 | 0.16 | 0.14 | 4.53 | 3.48 | FFAS-3D | ------------------------------------------------------GPAPFYPLEDGTAGEQLHKAMKRYPGTIAFTDAEVNITYAEYFEMSVRLAEAMGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSTGLPKGVALPHRTACVRFSHARDPIFIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIAGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAVGK---VVPFFEAKVVDLDTGKTL----------GVNQRGELC--VRGPMIMSGYVNNPEATNALI------DKDGWLHSGDIAYWDEDEHFFIV---- | |||||||||||||
8 | 4zxjA | 0.18 | 0.16 | 5.04 | 0.95 | EigenThreader | EPTLIQHAERLKMLIAQFAADL------------------PGEYAQLAQLN-----ATQVEIPETTLSALVAEQAAKTPDAPALADARYLFSYREMREQVVALANLLGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTD----------------DQLTSLCYNA----------------PLTPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTGDVVAQKTPCSFDV-SVWEFFWPFIAGAKLVMAAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTRQSCATLKQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVWYPAFRGSSVPIGYPV-----WNTGLRILDAMMHPV-----------PPGVAGDLYLTGI--QLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRSD | |||||||||||||
9 | 6oyfA | 0.17 | 0.16 | 5.16 | 2.71 | CNFpred | --------LYERETVQRHAGYLKALLAGMVADDTQPVQRIGILGEAERHRLLVEWNDTAREHRTVCVHELFEQQVERSPDAVALVYEGQQLSYRELDRQANRLARQLGVGPDERVAVCTERCLEMVVALLAVLKAGGAYVPLDPGYPAERLEYMLADSAPKVLLRQSGQTLEP--------GAGVAVLALDGEASQPWQAQPAQRLSRD---------DSGVQPHHLAYVIYTSGSTGRPKGVMVEHAGVVNRLLWMQAYGLQPQEAVLQKTPFG-FDVSVWEFFWPLAVGARLVMARPQDPAYLVETIVGQDIGTLHFVPSMLQAFVDSEGVQRCRGVRRIVCSGEALPGALARRLRQQLPQVELHNLYGPTEATVDVTAWACDAAELPDNIPIGRPVDNTTMYVLDA-----------HGQPVPTGVAGEIHIGGV--QVARGYLGRPELTRERFVPDPYAGRARLYKTGDLGRWLLDGTLEYLGRND | |||||||||||||
10 | 7kdnE1 | 0.17 | 0.15 | 5.04 | 1.33 | DEthreader | KAFYEKHPSKTHLKDLDEYKK------------------------TFWARMARELTTHWFVEGRLNASFNCDRHAIKNPNKVAIIYAGRIITYGELLREVSRVAWVLKVKKGDTVAIYLPMIPEAVVAFLACARIGAIHSVVFAGFSSDSLRDRVLDAGSKVVITTDETKRIVDEALKQC-PDVTSVLVYKRGEVWTRDIWWHEEVEKYP-C-Y--VAPESMSSEDPLFLLYTSGSTGKPKGVMHTTAYLLGAAMTGKYVDIHDDDRFFCGGDVGWITGHTYVVYAPLLLGCSTVVFESTPFSRYWDVIEKHKVTQFYVAPTALRLLKRGDEHIHHKMEHLRILGVGPIAAEVWKWYFEKGKEAHICDTYWQTETGSHVSPLTSTKPGSASLPF-F----GIEPAIIDP--VSGEE-------ISGNDVEGVLAFKQPWPSMARTVWGAHKRYMDTYLNVYKG----YYFTGDGAGRDHDGYYWIRGRVD | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |