Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380
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| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MVEAEELAQLRLLNLELLRQLWVGQDAVRRSVARAASESSLESSSSYNSETPSTPETSSTSLSTSCPRGRSSVWGPPDACRGDLRDVARSGVASLPPAKCQHQESLGRPRPHSAPSLGTSSLRDPEPSGRLGDPGPQEAQTPRSILAQQSKLSKPRVTFSEESAVPKRSWRLRPYLGYDWIAGSLDTSSSITSQPEAFFSKLQEFRETNKEECICSHPEPQLPGLRESSGSGVEEDHECVYCYRVNRRLFPVPVDPGTPCRLCRTPRDQQGPGTLAQPAHVRVSIPLSILEPPHRYHIHRRKSFDASDTLALPRHCLLGWDIFPPKSEKSSAPRNLDLWSSVSAEAQHQKLSGTSSPFHPASPMQMLPPTPTWSVPQVPRPHVPRQKP |
1 | 6f1tg | 0.11 | 0.10 | 3.51 | 1.03 | SPARKS-K | | -LTEEEKQQILHS-----EEFLSFFDHSTRIVERALSEQKLSLNRQFFDERWSSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSSATFAKFHPNLVVGSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYVNVVGTQNAHNLI----------SIST------DGKICSWSLDMLSHPQDS-----------------MELVHKQSKAVAVTSMSFPVGDVNNFVVGSE-EGSVYTACRHGSK-AGISEMFEGHQGPGAVDFSHLFVTSSFDWTVKPLYSFEDNAGYMWSPTHPALFACVDGMGWNLNNDTEEGNPALNRVRWTHVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINAN---------- |
2 | 2pffB | 0.06 | 0.05 | 2.38 | 1.21 | MapAlign | | LLSIPISCPLIGVIQLAHYVVTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------- |
3 | 6q2dC | 0.06 | 0.06 | 2.48 | 0.57 | CEthreader | | ---------RREKMIAKIKDLMYKPDSIKTTLSDNLLAGTIDAANVSMVHNYKDEEYLIGAVVVVCAVEGIMPQTETVLRQALKENVKPVLFINKVDRLINELKLEPEELQKRFINIYMEANKLIKNMAPEDKKEEWAVDFTDGSVAFGSAYHNWAINVPMMQETGVNFKDIIDYCNDDKQKELAQKVPLSEVLLGMVVEHLPSPKVSQEYRVPNIWEGDIESPAGQGMITTSPDGPLAVMVTNVSVAGEIATGRVYGGSIEKGTEVYLVGSHSKSRVQQVGVYFGPERV---------NTDAVPAGNIVYV--AGAKGAIAGETICSPEDKIKEFEGLDHISEPVVTVAVEAKNTKDLPKLIEVLRQVAKEDPTIKVEINEETGEHL |
4 | 6gmhQ | 0.05 | 0.05 | 2.31 | 0.78 | EigenThreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEDYYYQATQFASSSFVLPFFGLGQMYIYRGN-----LGEAKKYFLASLDRAKAEAEHDEHISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDHKQPSTQSDT |
5 | 7abi4 | 0.15 | 0.12 | 4.10 | 0.49 | FFAS-3D | | ---HEEKERLMDVMAKEMRDQINSDHRTRAMQDRYMEVSGNLRDLYDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICV-------PMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHD----CYLKYINLKASEKLDYITYLDQLFDIPKERKNAEYKRYEYLQDYTDRVKPLQDQNELFGKIQAEFEKKWENGTFPGWEERAQRLFSTGTKRDTERNKDIAFLENVQRKQAEIPLNINYNCEICGN----------------------------YTYR--GPKAFQRHFA--EWRHCL-GIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTE-----------------EEYEDSSGNVVNKK- |
6 | 5x6oG | 0.08 | 0.08 | 3.06 | 1.01 | SPARKS-K | | IEREKEKNIQAVKVNEL-VKHLQELAKLKQELQKLEDEKKFLQRGKSKREVITNVKSTTLNTITPDSSSVAIEAKPQSPQSKKRKISDNLLKKNMVPLNLESHQIIGADLSTIEILNRLKLDYITEFKFKNFVIAKGAP--IGKSIVSLLTLDRFIDTLLEKEISVHPNESKLAVFLVALMYQIVQFRPS--ATHNLALKDCFLFICDLIRIYHHVLKVPIHESNMNLHVEPQIFQYELIYSFDLLEGILRVLQS--HPKQTYMEFFDENLTISYKPMVAVEVVNIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSYNENVDTTTLHMSKYHDFFGLIRNIGD---NELGGLISKLIYTDRLQSVPRVISKEDIGTAP |
7 | 2wyhA | 0.15 | 0.05 | 1.57 | 0.46 | CNFpred | | -------IYLKQANTRVSRQLENITEPLAAMAYEVTSTY------------------------------------------------------------------------------PHDQLRY--------------------------------------------AWKTLMQHPHDSICGCSVD--SVHREMMTRFEKAYEVGHYLAKEAAKQADAIDTRDFPMD--------SQPFVLFNTSG---------------------------HSKTSVAELSLTWK---------------------------------------------------------------------------------------------------- |
8 | 5kf6A | 0.06 | 0.04 | 1.69 | 0.67 | DEthreader | | -------------------------AP-AP-FAD-FAPPV--T-Y------------GVMCEALRIPDT-ATRDALIRDKI----E-IRGVDAMRGEVTARSKELEEK-------YDMLGRYDYS-------------GTHETLLAYLVRL-------AGLDLTLALSTGLIIEAGKS--------------------------WN--PAEETPLIAAGVLRIPASLQLLP-V-LAETAGVMFTGS--TEVARLIQAQL------RLSPAGRPIP--LIAETGRCSALRVLCLILLKLLHIGRTRLSVDVGP--P--YGLTFGLIATSRIKAGNIFGGGPKAGGPLYLGRL---------V-TTAPVPPHALLHAGNSTVGL------ |
9 | 4bp8A | 0.07 | 0.07 | 2.83 | 1.16 | MapAlign | | RADPEVLAHLHLEKDYYEKRAVDIKDLAETIYQEHIIEETDSAPYVYDRFLYYTRDVKGLSYKLHCRVPAGKTPGEGEDEEIVLDENKLAEGKSFCVVGCVAPAPPEHALVAYSVDYCGDEVYSIRFVRDVVADKVEGTNGSVVWGPNAECFFYITKDASKRDNKVWRVCLYTDDDPLFSVGVGRSGDGKTLIICSSHLLDLRKGVKHNTLEVRPREKGVRYTVEHGTDTLIVLTNKVNGKVVLTKPTDWGTVLIIDDVAVKFAVLSGRRDGLTRVWTVRLTLKELHFDEPVFTAHVVCSQKTYDASLLRLRYSSTTPTVWYDEDVLSGERKVVKARKVGGGFESKNYVCRRELATAPDGTKVPISLVY------------------- |
10 | 2nbiA1 | 0.17 | 0.15 | 5.02 | 1.00 | MUSTER | | PSECADVLE----ECPIDECFLPYSDA-----SRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTP-------PSTPTVITSPAPSSQPSQCAEIEQCPIDECFLPYGDSSRPLDCTDPAVNRPD------------DVLPTPQNINCPCAFCRPDNPMFTPSPDGSPPICSPTMPEPSSQPSDCGEVIEECPIDPKSDSARPPDCT---AVGRPDCNVLPFPNNIGCPSCCPFECSPDNTPSPDGSPPNCSPTMLPSPSP--SAVTVPLTPAPSSAP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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