Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC ALRKQEEEEIKRSKALSDSYELSTDLQDKKVEMLERKYGGSFLSRRAARTIQTAFRQYRMNKNFERLRSSASESRMSRRIILSNMRMQFSFEEYEKAQNPAYFEGHKGPPGRAPIPHRHYPAPEGPAPAPPGPLPPAPNSGTGPSGVAGGRRLGKCEAAGENSDGGDNESLESSSNSNETINCSSGSSSRDSLREPPATGLCKQTYQRETRHSWDSPAFNNDVVQRRHYRIGLNLFNKKPEKGIQYLIERGFLSD |
1 | 6e5oY | 0.08 | 0.07 | 2.83 | 1.10 | SPARKS-K | | PAVIALTDPEGCPLRIGEGYKEKQRAIQAAKEVEQRRAGGYNLADDMVRNSARDLFYHAVTHDA-----VLVFANLSRGFGTFMTERQYTEDWLTAKLAYEGLTSKTYLAQYTSKTCSNCGFTITYADMDVMLVRLKKTSDGWATTLNNKELKAEYQ---------ITYYNRYKRQTVSKWTKRDEALFLLKKRFSHRPVQEQ--FVC---LDCGHEVHAAEQAALNIARSWLFLNSQPFVGAWQAFYKRRLKEV |
2 | 5azaA | 0.04 | 0.04 | 2.00 | 1.05 | MapAlign | | VDNAGAKAGLTFLVDLIKNKHMAFWYAVRTAVINAASGRQTVDEALKDAQTRIAAAKAEAAAKAEAAAKAAAAISEVDFESWELNYFLVYLNDWAKFNAISYLGGAITRREYNGDESGRGAV----------------TTLLPLPRYGEKYVNLYAKVIVDVSNSSVKVTVGDRECDPLMVTFTPSGKTIKGTGTCSDGNAFPYVLHLTPTIGVLAYASTIPGFSDKLFSNFEPVYESGNVIVYEENINGTWKQV |
3 | 4c0aA1 | 0.81 | 0.12 | 3.32 | 2.04 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPD |
4 | 1vt4I | 0.08 | 0.08 | 3.22 | 0.56 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 7kogB | 0.07 | 0.07 | 2.80 | 0.63 | EigenThreader | | NSDLLRQLEEAESQVSQLSKIKVSLTTQLEDTKRLADEEARERATLLGKFRNLEHDLDNIREQLEEEAEGKADIQRQLSKANAEAQLWRTKYESEGVARAEELEEAKRKLQARLAEAEETIESLNQKVIALEKTKQRLATEVEDLQLEVDRATAIANAAEKKAKAIDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEAQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKQKKRLEVEKD |
6 | 2xd8A | 0.12 | 0.11 | 3.72 | 0.47 | FFAS-3D | | -----DLDETL------AHYELRGEISKKIGYALAEK-----YDRLIFRSITRGARSAALVNAFYDAAAAMDEKGVQGRCAVLNPRQYYALIQDIGSNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTNGDVSVIYQGDVILGRMA------MGADYL--NPAAAV----------- |
7 | 7abiM | 0.09 | 0.08 | 3.19 | 1.05 | SPARKS-K | | QSLNVDAIIRGGLTRFTDQ---LGKLWCSLADYYIRS--GHF--EKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPRE-IINTYTEAVQTVDPFKATGEDNGQLDDARVILEKATKVNFKQVDDLASVWCRHENYDEALRLLRKATALPARRAEYFVQNRVYKSLKVWSMLADLTFQSTKAVYDRILDLRI |
8 | 3pikA | 0.04 | 0.01 | 0.42 | 0.49 | CNFpred | | --------------------RLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAEETLRN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 4j5tA | 0.06 | 0.03 | 1.40 | 0.67 | DEthreader | | ----D---D--KNSTREQVTELITWSLNEINARFDKQFSFGVKRRFALETLSNLLGGIGRGPR-ILGNEA-S----------------------------------------------------------------------------------------------------KKIYPKLLMIAHEQRYAQIEQEVVLDWENCSPKLEK-A-EASNA-KKLYQSLKINLSNNIYKVWEEQGYCYEAEHFTGWTALV |
10 | 1vt4I | 0.09 | 0.09 | 3.53 | 1.03 | MapAlign | | --QYFYSHIGHHLKNILFRMVFLDFRTLQQLKFYKPYIDNDPKYERLVNAILDFLPKAEDEAIFEEAHKQVQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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