Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCHHHHHHHHHHHHHHHSSSSSCSSSSSSCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHCCCCCCCCSSSSSSHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCSSSSSCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCSSSSSCCCHCHHHHHHHHHHHHCCCCCCCHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCSHHHHHHHHC MAAATRGCRPWGSLLGLLGLVSAAAAAWDLASLRCTLGAFCECDFRPDLPGLECDLAQHLAGQHLAKALVVKALKAFVRDPAPTKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSPVLHFPHPSHIERYKKDLKSWVQGNLTACGRSLFLFDEMDKMPPGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGKQINQVALEAWRSRRDREEILLQELEPVISRAVLDNPHHGFSNSGIMEERLLDAVVPFLPLQRHHVRHCVLNELAQLGLEPRDEVVQAVLDSTTFFPEDEQLFSSNGCKTVASRIAFFL |
1 | 6e101 | 0.15 | 0.13 | 4.52 | 1.33 | DEthreader | | RDL-K--FVQPRIIVKTHNEHVSYIYLRDSGM---------PLGSLSGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATMKDPEKPGTFLFLGPTGVGKTELAKTLAIELF--NSK-DNLIRVNMSEFT-EAHSVSKITGSDSGQLTEAVREKPHSVVLFDELEKAHADVFKVLLQILGDGYINRNIDFSNTIIIMTSNLGAELFKKK-L-FF-DADNSGEYKMEDVRLSLIKKCKKV----FK-PEFV--NRIDKIGVFEPLNKKNLHKIVALRFKKLQVSVSEKAIDYII-DQSYD--PELGA--RPTLIFIEVIMKNV |
2 | 5j1sA | 0.45 | 0.38 | 11.21 | 1.69 | SPARKS-K | | ---------------------------------------------SLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDQMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYY |
3 | 5j1sA | 0.45 | 0.38 | 11.20 | 0.87 | MapAlign | | ----------------------------------------------LSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDQMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYY |
4 | 5j1sA | 0.45 | 0.38 | 11.21 | 0.74 | CEthreader | | ---------------------------------------------SLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDQMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYY |
5 | 5j1sA | 0.45 | 0.38 | 11.21 | 1.68 | MUSTER | | ---------------------------------------------SLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDQMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYY |
6 | 5j1sA | 0.45 | 0.38 | 11.21 | 1.57 | HHsearch | | ---------------------------------------------SLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDQMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYY |
7 | 5j1sA | 0.40 | 0.34 | 9.92 | 2.83 | FFAS-3D | | ----------------------------------------------LSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEG------GLNSDYVHLFVATLHFPHASNITLYKDQLQVSACARSIFIFDQMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYY |
8 | 6azyA | 0.16 | 0.14 | 4.65 | 0.77 | EigenThreader | | ARAADIRYYAIPDLEKRLAQLQAEKSQADAERADGLLRWTGIPVSNLQRSHMEEYMKQHVVGQDEAIKAICDAIRLSRTQNRNRPLASFLFLGPTGCGKTLCVKELAAFLFN--DPGAIVRIDMSEYMEKHAVSRLG-------QLTEAVRRRPYTVVLFDEMEKAHKDVSNLLLQILDDGSKGRRVDFKNTIIVMTSNLTKNAVLATARR--------------------------------HFANEFIN-MIDELIVFNRLTPSNIRKIVDVRLKEVQERLDEKQDLLAQQGFDPVYGARPLNRLIQHALLTQLSRLLL |
9 | 5j1sA | 0.45 | 0.38 | 11.19 | 1.90 | CNFpred | | -------------------------------------------------EALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDQMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYY |
10 | 6e1012 | 0.15 | 0.13 | 4.52 | 1.33 | DEthreader | | RDL-K--FVQPRIIVKTHNEHVSYIYLRDSGM---------PLGSLSGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATMKDPEKPGTFLFLGPTGVGKTELAKTLAIELF--NSK-DNLIRVNMSEFT-EAHSVSKITGSDSGQLTEAVREKPHSVVLFDELEKAHADVFKVLLQILGDGYINRNIDFSNTIIIMTSNLGAELFKKK-L-FF-DADNSGEYKMEDVRLSLIKKCKKV----FK-PEFV--NRIDKIGVFEPLNKKNLHKIVALRFKKLQVSVSEKAIDYII-DQSYD--PELGA--RPTLIFIEVIMKNV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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