Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHHHHCC STYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAFLASLERGRRIIDRTLRTLGPSDMFPAEVAWSLSLCGDLGLPLDMVELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQ |
1 | 1riqA | 0.27 | 0.24 | 7.42 | 1.17 | DEthreader | | RNFEIDIIFPLIQFGEEVSGKKYG-------EKFETDVALRVIADHLRAITFAISDGVIPSNEGRGYVIRRILRRA-RFGYK-LGIENPFLYKGVDLVVDI-KEPYPELELSREFVKGIVKGEEKRFIKTLKAGEYIQE-VIQKALEEGRLSGKEVFTAYDTY-GFPVDLIDEIARE--K-GLGI--DLEGFQCELEERHLK----- |
2 | 3hxxA | 0.32 | 0.29 | 8.87 | 2.50 | SPARKS-K | | SNYDIDLFRTLIQAVAKVTGA-----------TDLSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLG-AKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSG-DTLDGETAFRLYDTYG--FPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGF-- |
3 | 3hxxA | 0.33 | 0.30 | 8.99 | 1.66 | MapAlign | | -NYDIDLFRTLIQAVAKVTGATDL-----------SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKL-SGDTLDGETAFRLY--DTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREA----- |
4 | 3hxxA | 0.33 | 0.30 | 9.00 | 1.61 | CEthreader | | SNYDIDLFRTLIQAVAKVTGATD-----------LSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLG-AKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKL-SGDTLDGETAFRL--YDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGF-- |
5 | 4xeoA2 | 0.48 | 0.29 | 8.57 | 1.52 | MUSTER | | -------FVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILHRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSR-------------------------------------------------------------------------- |
6 | 2zzgA | 0.19 | 0.19 | 6.06 | 4.09 | HHsearch | | TAYDA-VLGYVVEPLKKMAGIEKLAGMFDIEDLRRPYELIYAIADHTKALTFMLADGVVPSNVKAGYLARLLIRKSIRHLR-ELGLEVP-LSEIVALHIKELHKTFPEFKEMEDIILEMIELEEKKYAETLRRGSDLVRREIAKLKGIKEIPVEKLVTF--YESHGLTPEIVKEIAEKEGVKVNIDNFYSMVAKEA-ERTLVDFELK |
7 | 3hxxA | 0.34 | 0.31 | 9.26 | 2.37 | FFAS-3D | | SNYDIDLFRTLIQAVAKVTGATD-----------LSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNM-LGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGD---TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEE-QRRRAREASG-- |
8 | 3hxxA | 0.30 | 0.28 | 8.34 | 1.32 | EigenThreader | | SNYDIDLFRTLIQAVAKVTGATDL-----------SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLG-AKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYG---FPVDLTADVCRE--RNIKEAGFEAAMEEQRRRAREASGF-- |
9 | 1riqA | 0.28 | 0.26 | 7.83 | 1.51 | CNFpred | | SNFEIDIIFPLIQFGEEVSGKKYGEK-------FETDVALRVIADHLRAITFAISDGVIPSNEGRGYVIRRILRRAMRFGYKL-GIENPFLYKGVDLVVDIMKEPYPELELSREFVKGIVKGEEKRFIKTLKAGMEYIQEVIQKALGRKTLSGKEVFT--AYDTYGFPVDLIDEIAREKGLGIDLEGFQCELEEQRERAR------- |
10 | 2zzgA | 0.18 | 0.16 | 5.18 | 1.17 | DEthreader | | EAYDAV-LGYVVEPLKKMAGIEKIEILMENLEAIRPYELIYAIADHTKALTFMLADGVVPSNVKAGYLARLLIRKSIRHLR-ELGLE-VPLSEIVALHIKELHKTFPEFKEMEDIILEMIELEEKKYAETLRRGSDLVRREIAKKKGIKEIPVEKLVTFYE-S-HGLTPEIVKEIAEKEGVKVNI--------------T------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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