Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCC MAAPPKAPIRVRNLTIRAGALTGKENNMLQPETHIFTAPEEGSSQGALLLGQAPEPLSLPCTPVTLEQQLVSPSGDPHRAPALPSICSTLILQPCATLDPLLLQPQVPKVSDQALVSAHSEWQRKLEAAEALLTLRNSAQAPPDSISLHQPCNPPAPAGDKGFQPPSPSLRPRPASSISLPIGHLGCISLLS |
1 | 6jyxA | 0.06 | 0.06 | 2.53 | 0.57 | CEthreader | | GEKRKRYYTNYYFNQNHSLETGWLYDQSNWYYLAKTEINGENYLGGERRAGWINDDSTWYYLDPTTGIMQTGWQYLGNKWYYLRSSGAMATGWYQEGTTWYYLDHPNGDMKTGWQNLGNKWYYLRSSGAMATGWYQDGSTWYYLNAGNGDMKTGWFQVNGNWYYAYSSGALAVNTTVDGYSVNYNGEWV--- |
2 | 6rnqA | 0.09 | 0.09 | 3.52 | 0.47 | EigenThreader | | RSLLPLSTSLDHHLGLFTDRATLYRMIDIEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDNLVAMAPAAGYHVWLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHF--YREAIAIAKARLRPEDPVLKDLYLSWGTVLERDGHYAVAAKCYLGATCAYDAAKVLAKTAAELAAI |
3 | 2xd8A | 0.12 | 0.11 | 4.09 | 0.50 | FFAS-3D | | MANANQVALGRSNLSTGTGYGGATDKYALYLKIARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSAFVYDLDETLAHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSATNFVEPGGTQIRVGSGEKGVSSQGRCAVLNPRQYYALGVIEIAGIHIY- |
4 | 3l6wA2 | 0.09 | 0.08 | 3.16 | 1.17 | SPARKS-K | | EELEEVLRSLRLKSRVFAGFVL--SGIRTTAVVKVYIKSGTDSDDERLYITETVHNLNLTDDHVKFRFDLKKYDHTELDASVLP--APIIVRRPNNAVFDIIEIPIGKDVNPPKVVVKRGTKIMFM-------------SVDEAVTTPMLNLGCKVPPFSFHAFELGKMYSVESGDYFMTANNLRIHVHVD- |
5 | 3qk8A | 0.12 | 0.03 | 1.09 | 0.38 | CNFpred | | ---------------------------------------------------------------------------------------RVVLVRGE---GKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLVNL------------------------------------------------------ |
6 | 6cinA | 0.05 | 0.04 | 1.94 | 0.83 | DEthreader | | ---ASQEDALVAHATLARAAF-----QSEAANPYATIVMEVAHYHDSMGSDRTGLGS-DSKKTTKY-K-SLVCPNDVCPTVKGSRQLFGDRMI------IANATCSSISSLFEDNAEFGYGMALAVAKRQDELATAISKALEAAKAACEGW------------------LAGKDDADRGDKDR-QKDYTKSK |
7 | 3ei2A3 | 0.06 | 0.06 | 2.67 | 0.89 | MapAlign | | ---ERQGQGQLVTCSGAFKEGSLRIIIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYL-KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAEN |
8 | 6etxG | 0.11 | 0.11 | 3.95 | 0.79 | MUSTER | | LFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALD |
9 | 5ijxA | 0.16 | 0.11 | 3.64 | 0.59 | HHsearch | | GVDPTAPSLHIGHLTAKIGDPTGRRALENNNTWWN----------------K-QSLKEVLGTSLRLGP-LDYVLASGEGS---IAEFCYPI-Q---GWDFWYLKVQQVGGSDQY--------G-NILFG-DAIGILKANAPLANPYGITTP-LLTTASGEK-------------------------AVWLDT |
10 | 4hizA2 | 0.07 | 0.07 | 2.83 | 0.46 | CEthreader | | PEWLTPIHPDYTADKVNYHCMSMGVCGNRLYAVIETRYLSNMRLKKAELWSRPMPWEITELPDVAYSTNADLCVTETHSFTVIDDDNYTFAVGYHSPRRLGILYFNNAYSDPSSFTRRTISQEYADNAAEPCIKYYDGLYLTTRGTSTSAAGSTLAMSADLGENWNYLRFPNNVHHTNLPFAKVGDYLYIFG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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