>Q5HYN5 (189 residues) MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMT GHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQR EINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKH LKKKLKRMI |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC |
Confidence | 985300112489988779999999875201025421278899999787778854466677668898766554444578897531125898753335545556788755444467857898776999999999998347468999999987479999999999999999999988999999999999849 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI |
Prediction | 744434522443744442243254744544443432446434656245744446444234554144152443355244256642354445453344344453357646255436355326622350133004203433551540061076151446003300430041033034540062036106627 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI | |||||||||||||||||||
1 | 3bwtA | 0.06 | 0.05 | 2.38 | 0.69 | CEthreader | -----SRFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPH-FVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNG-NHVIQKCLQR--LKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHG | |||||||||||||
2 | 4d0pA | 0.03 | 0.03 | 1.80 | 0.65 | EigenThreader | SGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPIYEKEEDWRNAAQVLVGIP---------LETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRK--FIEAAQRYNELSYKESERLEALKHALHCTILAQRSRMLATLFKDCQQLA | |||||||||||||
3 | 6w1sD | 0.11 | 0.08 | 2.88 | 0.50 | FFAS-3D | ---------------------PPPMQYIKEYTDENIQEGLAPKPPPPIK------------------------DSYMMFGNQFQCDDLIIRPLESQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRKLEDLKLLFVHVHHLINEYR-PHQARETLRVMMEVQKRQ--RLETAERFQKHLERV- | |||||||||||||
4 | 4c8hA2 | 0.13 | 0.08 | 2.92 | 0.73 | SPARKS-K | -----------------------------------------------------------------PVFVKSKLLEENKAILNKEIQIPVSAYLRSKVLSELLTDTLENDGEYGNENEVLAALNGAYDKALLRLFASADQNVEKALSLAHELKQ-----DRALTAAVKISERAELPSLVKKINNIREARY | |||||||||||||
5 | 4uosA | 0.18 | 0.06 | 2.07 | 0.49 | CNFpred | -----------------------------------------------------------------------------------------------------------------------LKMVIELAEKILKKAKE---MAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLIKKVKEMLEKMIKEIK | |||||||||||||
6 | 5amqA | 0.04 | 0.03 | 1.70 | 0.83 | DEthreader | N-----MS-KSARSSWKQIMKKLEPVLWEQQNISVAMCAVSPGFLTLLFHD-----R--MN-LAISLKMEKILKEAITLLDG-QDKMENDKIIDFAMKEF-----TNCIKEF-SLF-IYGRFLLTSVGDC-AY-----IGPYEDLASRISSTAICPLAWVSIAISHWMSLPQNDPI-RIINGVLDAPLS | |||||||||||||
7 | 4p3zA | 0.09 | 0.08 | 3.03 | 0.82 | MapAlign | --------------------TDLADKYASGNSEISGQELRGLRDAIGDDASPEDILALVQEKIKDPALQSTALDYLVQTTPPSQGKLKEALIQARNTHTEQFGRTAIGAKNILFASQEYADQLPSGLRSLYLEVTGDTHTCDQLLSMLQDR-YTYQDMAIVSSFLMKGMATEQLQVLMTETRNLQAVLT | |||||||||||||
8 | 5n5xA2 | 0.08 | 0.08 | 3.10 | 0.54 | MUSTER | IIVDHPEWASLFNNADEREKESIGALVSQIKLKERERISRVQNLIEHENSHDEDKYLQDLGYRLS-IATNELLESWQKTKDESILSGSLSHSKLKNLLENSDSFASQYYQDQDVTFIGFEKLLHLF-------LHEDVPGLDIFYNKLLQCQAELLTKEIVKDIIWS-LARLKPSLFEPIQNEISRSLS | |||||||||||||
9 | 1vt4I3 | 0.11 | 0.06 | 2.08 | 0.55 | HHsearch | ------------------------------------------------EYALHRSIVNFDSDDLIPPYLDQYFY-------------------------------------------SHIGHHLKEHPERMTLFRMVFLDFRFLEQKIRHDSGSILNTLQQLKFYKPYIPKYER--LVNAILDFLPKIE | |||||||||||||
10 | 3bwtA1 | 0.12 | 0.07 | 2.41 | 0.59 | CEthreader | ----------------------------------------------------------------------------------SRFADAVLDQYIGSIHSLCKDQHGCRFLQKQLGSKAADAIFEETKDYTVELMTDSFG-NYLIQKLLEE--VTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |