Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MEKLYKENEGKPENERNLESEGKPEDEGSTEDEGKSDEEEKPDMEGKTECEGKREDEGEPGDEGQLEDEGNQEKQGKSEGEDKPQSEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRGQKDLEDVPYV |
1 | 4nl6A | 0.13 | 0.12 | 4.02 | 1.08 | SPARKS-K | | LIKAYDKAVASFKHALK--NGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICEV-----ANNIEQNAQENENESQVSTDESENS------------------RSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPP |
2 | 6fmlG | 0.11 | 0.11 | 3.88 | 1.01 | MUSTER | | LDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSM |
3 | 1vt4I | 0.12 | 0.12 | 4.15 | 0.57 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 7ko4P | 0.06 | 0.06 | 2.57 | 0.70 | EigenThreader | | QKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKS |
5 | 2xd8A | 0.11 | 0.10 | 3.68 | 0.40 | FFAS-3D | | --------NANQVALGRSNLSTGTGYGGATDKYALYLKLFSGEMFKGFQHETIARDTKRTLKNGKSLGRMTSSFHTPGTPILGNADKAPPVAEKTIVMDDLLISSAFVYDLDETLAHYEL---RGEISKKIGYALAEK--YDRLIFRSITRGARSNAFYDAAAAMDEYALIQDIGSNGLVNRDVQGSALQSGNGVIEAGIHNIP-- |
6 | 6enyG | 0.11 | 0.09 | 3.35 | 1.06 | SPARKS-K | | TLIVRPDNDNSQVESGSLEDDWDFLKKIKDPDASKPEDWD--EAKIDDPTDSKPEDWDKPE-HIPDPDAKKPEDW-DEEMDGEWEPPVIQNPEYKGEWKPRQIDNDYKGTWIHPEIDNPEYSPDPSIYANDEAYAEEFGNETGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKE------------------------- |
7 | 4hseA | 0.13 | 0.03 | 1.01 | 0.42 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------LKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQH--RLDEVRREIE------------------------------ |
8 | 2zuoM | 0.06 | 0.04 | 1.92 | 0.83 | DEthreader | | NPVSITPLQVTALVEIIQALRARKECFDKGRLFRDLRGV-WLVTFFLQPGERLERGAKVEVVEERQIVLVLWEKEPEEQF-TV-L-SLSAGKTDVQSVEPRLSVLAEITTNSQEAAAKHEAQRLEQRGRLERQKILDQSEAEKARKELLELEAMS-A------------------------------------------------- |
9 | 2zxqA | 0.05 | 0.05 | 2.31 | 0.97 | MapAlign | | KGYGNEGHDSGHPDYGDIGQRLGGADDMNTMMEEGSKYGARFGVHVNASEMYPEAKAFSEDMVRRNSAGGLSYGWNWLDQGVGIDGIYDLASGSRVSRFADLSKEVGDNMDFIYLDVWGNLTSSGSEDSWETRKMSKMINSEVMRFLRNAYIKNLYTHDVSTKFISNGNVVVVSRGSNDTSSAAYRQRTITFNGVKVASGVVSAGD |
10 | 6etxG | 0.10 | 0.10 | 3.75 | 0.95 | MUSTER | | LSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAELRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRPGKESLITD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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