Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSCCSSSSSSSCCCCCCCCCSSSSSCCCCCCHHHHHHHHHHHHHCCCSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCSSSSSSCCHHHHHHHHHHHCCCCCSSSSSSSSSSCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCSSSSSSCCCCCCCCHHHHHHHHHHCCCCSSSSSCCCCCCCHHHCCHHHHHHHHHHHHHHC MVRRDRLRRMREWWVQVGLLAVPLLAAYLHIPPPQLSPALHSWKSSGKFFTYKGLRIFYQDSVGVVGSPEIVVLLHGFPTSSYDWYKIWEGLTLRFHRVIALDFLGFGFSDKPRPHHYSIFEQASIVEALLRHLGLQNRRINLLSHDYGDIVAQELLYRYKQNRSGRLTIKSLCLSNGGIFPETHRPLLLQKLLKDGGVLSPILTRLMNFFVFSRGLTPVFGPYTRPSESELWDMWAGIRNNDGNLVIDSLLQYINQRKKFRRRWVGALASVTIPIHFIYGPLDPVNPYPEFLELYRKTLPRSTVSILDDHISHYPQLEDPMGFLNAYMGFINSF |
1 | 4qlaA | 0.17 | 0.15 | 4.93 | 1.33 | DEthreader | | ------------------ERIKKRRLKYWAEEYPERQKFLNQY--PHFKTNIQGLNIHFMRITPKVVEIVPLLLLHGWPGSVREFYEAIPHLTAVALEIIAPSLPGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYK--QYYVQGGDWGALIGSAMATFFP-----KE-IIGFHSNMALTLSTYLLELGYMHIQTKPDTVGIGLTSAGLLAYILEKFSTWTNLGYRWTKDQLIDNLMLYWSTKSIVTSMRLYAESFSSRHFDLKLDEI-Q-VQVPTWVLQAKHE--LAYQP-PCILKMKYPKLNASVI-EDGGHFLAFELPEIFAKDVLKAIGER |
2 | 6i8wA | 0.20 | 0.18 | 5.83 | 1.46 | SPARKS-K | | ------KRFLLGLVLLLAVAAGVLYFVPATLLASVRTVERGLAGLSEHSVQVDNLEIAYLEGG--SEKNPTLLLIHGFGADKDNWLRFARPLTERY-HVVALDLPGFGDSSKPQQASYDVGTQAERVANFAAAIGVR--RLHLAGNSMGGHIAALYAARHPE------QVLSLALIDNAGVMPARKSE-LFEDLERGENPL-VVRQPEDFQKLLDFVF---VQQPPLPA-----PLKRYLGERAVAASAFNAQIFEQLRQRYIPLEPELPKIEAPTLLLWGDRDRVLDVS-SIEVMRPLLKRPSVVIME-NCGHVPMVERPEETAQHYQAFLDGV |
3 | 4meaA | 0.17 | 0.15 | 4.99 | 0.45 | MapAlign | | ---------------TPPAVSQQMFNKVK-----SNGLGQYAYGLSSKFIESEGVKLHYVEGGS---KGTPIVFIHGFGSTWKMWEPVMLSYMK-DHKVIAIDLPGLGQSGPILNDDYSAENTSKILIGAIKKI-AGKGPIYYVSHDLGNTASYPLVANNQ------GYIKKAVFMDSPIPDRAMFLGWHFGYFSFGDIAEKQIANDP-NLFFSYFIKTYAGKKEIFTPELLAELIEPYS---TRDKLKAAFGYYRSHADSIRQNEALLAKLTIPSMALTGQKG--V-NDVLVKEMRARFAQYTAIILP-DTGHWMVEENAEGVEKSLSNFL--- |
4 | 6i8wA | 0.21 | 0.19 | 6.07 | 0.31 | CEthreader | | ------KRFLLGLVLLLAVAAGVLYFVPATLLASVRTVERGLAGLSEHSVQVDNLEIAYLEGG--SEKNPTLLLIHGFGADKDNWLRFARPLTERY-HVVALDLPGFGDSSKPQQASYDVGTQAERVANFAAAIGVR--RLHLAGNSMGGHIAALYAARHPE------QVLSLALIDNA-GVMPARKSELFEDLERG-----ENPLVVRQPEDFQKLLDFVFVQQPPLPAPLKRYLGERA----VAASAFNAQIFEQLRQRYIPLEPELPKIEAPTLLLWGDRDRVLDV-SSIEVMRPLLKRPSVVIM-ENCGHVPMVERPEETAQHYQAFLDGV |
5 | 6i8wA | 0.21 | 0.19 | 6.07 | 1.31 | MUSTER | | ------KRFLLGLVLLLAVAAGVLYFVPATLLASVRTVERGLAGLSEHSVQVDNLEIAYLEGGSE--KNPTLLLIHGFGADKDNWLRFARPLT-ERYHVVALDLPGFGDSSKPQQASYDVGTQAERVANFAAAIGV--RRLHLAGNSMGGHIAALYAARHPEQ------VLSLALIDNAGVMPARKSELFEDLERGENPLV-----VRQPEDFQKLLDFVFVQQPPLPAPLKRYLGERAV--AASAFNAQIFEQLRQRYI---PLEPELPKIEAPTLLLWGDRDRVLDV-SSIEVMRPLLKRPSVVIM-ENCGHVPMVERPEETAQHYQAFLDGV |
6 | 1zd4A | 0.19 | 0.17 | 5.61 | 0.93 | HHsearch | | RAERDGLAQLMCELKQIYKALKELEKVTGLNTPAPLPTSCNPSDMSHGYVTVPRVRLHFVEL----GSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEEEYCMEVLCKEMVTFLDKLGLS--QAVFIGHDWGGMLVWYMALFYPE------RVRAVASLNTPFIPANPNMSPYQLYFQEPG-VAEAEL----EQNLSRTFKSLFRASRMVTEEEIQFYVQQFKKSGFR----GPLNWYRNMERNKWACKSLGRKILIPALMVTAEKDFVLVP-QMSQHMEDWIPHLKRGHI-EDCGHWTQMDKPTEVNQILIKWLDSD |
7 | 6y9gA | 0.21 | 0.17 | 5.42 | 2.17 | FFAS-3D | | -------------------------------------------PFERRHVEVLGSTMHYVET----GEGPPVLFLHGNPTSSYLWRNIIPHVADH-GRCIAPDLIGMGQSGKP-DIDYRFADHVRYLDAFIDALGLD--DVTLVVHDWGSALGFHWARRHPDRVKGIAFMEAIVRPMPSWDDFPPQARELFQALRTPGVGEKMILEQFIEKILPGSV------LRPLSEEEMDAYRAPFPTPESRKPVLQWPRELADVVAIVEAYAEWLATSDVPKLLFYAEPGALIS-PEQVEWCRENLPNLEVVHVGP-GLHFLQEDQPDAIGQAIADWLQRL |
8 | 5uroA | 0.17 | 0.15 | 4.89 | 0.67 | EigenThreader | | ------------------------------MDTSKLKP----NDPRVKYETKRGKTYSYILGEPAGPKLETVVLVHGWPDMAFGWRHQIPYLMSLGFQVVAPNMLGYAGTDAPDLSQFTLKSVSADIAELARSFVGQDGQIVLGGHDWGGAVVWRTAYYH------PELVKAVFSVCTPLHPLSAEYKPLEDIVAAGHMLLKGVEARIQGKDMLRRFFRAMFAPPLLDEQELEYYVEQYALQPELRGPLNWYRTRELNAKDEMDRAKNF---EMPALFVAASKDNALP-PAMSKGMDAFYKDLTRAEVD--ATHWALTQAGDEVNRVIGEWLNKA |
9 | 3u1tA | 0.19 | 0.16 | 5.09 | 1.76 | CNFpred | | --------------------------------------------FAKRTVEVEGATIAYVDEG----SGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDI-EYRLQDHVAYMDGFIDALGL--DDMVLVIHDWGSVIGMRHARLNPD------RVAAVAFMEALVPPAL-MGPQLGPLFRDLRTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVP-AEAEVLKNGEWLMASPIPKLLFHAEPGALAP-KPVVDYLSENVPNLEVRFVG-AGTHFLQEDHPHLIGQGIADWLRRN |
10 | 4meaA | 0.18 | 0.16 | 5.07 | 1.33 | DEthreader | | ----------------------PPAVSQQMNKVKNGLGQYAYAKLSSKFIESEGVKLHYVEGGS--K-GTPIVFIHGFGSTWKMWEPVMLSYMK-DHKVIAIDLPGLGQSGPILNDDYSAENTSKILIGAIKKIAGK-GPIYYVSHDLGNTASYPLVANNQ------GYIKKAVFMDSPIDMEYPGLGWHFGYFSFG-DIAEKQIANDPNLFFSYFIKTYAGKKEIFTPELLAELIEPYSTRDKLKAAFGYYRSHADSIRQNEALLANGKKLTIPSMALTGQKG--V-NDVLVKEMRARVPQYTAIILP-DTGHWMVEENAEGVEKSLSNFLF-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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